RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 FAM72BQ86X60 149 aa21.59■■□□□ 1.05
SCARB1-210ENST00000545493 PHF13Q86YI8 300 aaPredicted RBP21.59■■□□□ 1.05
SCARB1-210ENST00000545493 GRIN3AQ8TCU5 1115 aa21.59■■□□□ 1.05
SCARB1-210ENST00000545493 FAM172AQ8WUF8 416 aa21.59■■□□□ 1.05
SCARB1-210ENST00000545493 CENPIQ92674 756 aaPredicted RBP21.59■■□□□ 1.05
SCARB1-210ENST00000545493 MAGEB5Q9BZ81 275 aa21.59■■□□□ 1.05
SCARB1-210ENST00000545493 PREBQ9HCU5 417 aa21.59■■□□□ 1.05
SCARB1-210ENST00000545493 GDF3Q9NR23 364 aa21.59■■□□□ 1.05
SCARB1-210ENST00000545493 ADAM22Q9P0K1 906 aa21.59■■□□□ 1.05
SCARB1-210ENST00000545493 TMEM63CQ9P1W3 806 aa21.59■■□□□ 1.05
SCARB1-210ENST00000545493 ACTL7AQ9Y615 435 aa21.59■■□□□ 1.05
SCARB1-210ENST00000545493 CHD6Q8TD26 2715 aa21.59■■□□□ 1.05
SCARB1-210ENST00000545493 TCRBV5S1A1TA0A578 114 aa21.58■■□□□ 1.05
SCARB1-210ENST00000545493 KPNA3O00505 521 aaPredicted RBP21.58■■□□□ 1.05
SCARB1-210ENST00000545493 EPHA8P29322 1005 aaPredicted RBP21.58■■□□□ 1.05
SCARB1-210ENST00000545493 ADRA1BP35368 520 aa21.58■■□□□ 1.05
SCARB1-210ENST00000545493 ACVRL1P37023 503 aa21.58■■□□□ 1.05
SCARB1-210ENST00000545493 GNA12Q03113 381 aa21.58■■□□□ 1.05
SCARB1-210ENST00000545493 DPY19L3Q6ZPD9 716 aa21.58■■□□□ 1.05
SCARB1-210ENST00000545493 PRPF39Q86UA1 669 aaKnown RBP21.58■■□□□ 1.05
SCARB1-210ENST00000545493 GATAD2AQ86YP4 633 aa21.58■■□□□ 1.05
SCARB1-210ENST00000545493 C3orf20Q8ND61 904 aa21.58■■□□□ 1.05
SCARB1-210ENST00000545493 TMIEQ8NEW7 156 aa21.58■■□□□ 1.05
SCARB1-210ENST00000545493 SKA1Q96BD8 255 aa21.58■■□□□ 1.05
SCARB1-210ENST00000545493 SPON2Q9BUD6 331 aa21.58■■□□□ 1.05
SCARB1-210ENST00000545493 CA5BQ9Y2D0 317 aa21.58■■□□□ 1.05
SCARB1-210ENST00000545493 WASF2Q9Y6W5 498 aa21.58■■□□□ 1.05
SCARB1-210ENST00000545493 TLR4O00206 839 aa21.57■■□□□ 1.04
SCARB1-210ENST00000545493 DFNA5O60443 496 aa21.57■■□□□ 1.04
SCARB1-210ENST00000545493 CD160O95971 181 aa21.57■■□□□ 1.04
SCARB1-210ENST00000545493 PRNPP04156 253 aa21.57■■□□□ 1.04
SCARB1-210ENST00000545493 KRT3P12035 628 aa21.57■■□□□ 1.04
SCARB1-210ENST00000545493 GPD1P21695 349 aa21.57■■□□□ 1.04
SCARB1-210ENST00000545493 RFC1P35251 1148 aaPredicted RBP21.57■■□□□ 1.04
SCARB1-210ENST00000545493 ARL13BQ3SXY8 428 aa21.57■■□□□ 1.04
SCARB1-210ENST00000545493 RETSATQ6NUM9 610 aa21.57■■□□□ 1.04
SCARB1-210ENST00000545493 SPATS2Q86XZ4 545 aaKnown RBP21.57■■□□□ 1.04
SCARB1-210ENST00000545493 SAP25Q8TEE9 199 aa21.57■■□□□ 1.04
SCARB1-210ENST00000545493 NTAN1Q96AB6 310 aa21.57■■□□□ 1.04
SCARB1-210ENST00000545493 SELENOOQ9BVL4 669 aa21.57■■□□□ 1.04
SCARB1-210ENST00000545493 CEP44Q9C0F1 390 aa21.57■■□□□ 1.04
SCARB1-210ENST00000545493 OSBPL2Q9H1P3 480 aa21.57■■□□□ 1.04
SCARB1-210ENST00000545493 SEPT11Q9NVA2 429 aaKnown RBP21.57■■□□□ 1.04
SCARB1-210ENST00000545493 OR12D3Q9UGF7 316 aa21.57■■□□□ 1.04
SCARB1-210ENST00000545493 IL36AQ9UHA7 158 aa21.57■■□□□ 1.04
SCARB1-210ENST00000545493 DMTF1Q9Y222 760 aa21.57■■□□□ 1.04
SCARB1-210ENST00000545493 FCF1Q9Y324 198 aaKnown RBP21.57■■□□□ 1.04
SCARB1-210ENST00000545493 GOLGA8CPA6NN73 597 aa21.56■■□□□ 1.04
SCARB1-210ENST00000545493 CCP110O43303 1012 aa21.56■■□□□ 1.04
SCARB1-210ENST00000545493 RNGTTO60942 597 aaKnown RBP21.56■■□□□ 1.04
SCARB1-210ENST00000545493 LEFTY1O75610 366 aa21.56■■□□□ 1.04
SCARB1-210ENST00000545493 LRIG2O94898 1065 aa21.56■■□□□ 1.04
SCARB1-210ENST00000545493 CAPNS1P04632 268 aa21.56■■□□□ 1.04
SCARB1-210ENST00000545493 CALB1P05937 261 aa21.56■■□□□ 1.04
SCARB1-210ENST00000545493 NUDT1P36639 197 aa21.56■■□□□ 1.04
SCARB1-210ENST00000545493 MAPKAPK2P49137 400 aa21.56■■□□□ 1.04
SCARB1-210ENST00000545493 INAVAQ3KP66 663 aa21.56■■□□□ 1.04
SCARB1-210ENST00000545493 SETMARQ53H47 684 aaPredicted RBP21.56■■□□□ 1.04
SCARB1-210ENST00000545493 SLC45A4Q5BKX6 768 aa21.56■■□□□ 1.04
SCARB1-210ENST00000545493 RWDD4Q6NW29 188 aaKnown RBP21.56■■□□□ 1.04
SCARB1-210ENST00000545493 WDR59Q6PJI9 974 aa21.56■■□□□ 1.04
SCARB1-210ENST00000545493 TMEM145Q8NBT3 493 aa21.56■■□□□ 1.04
SCARB1-210ENST00000545493 AGPAT1Q99943 283 aa21.56■■□□□ 1.04
SCARB1-210ENST00000545493 TMEM248Q9NWD8 314 aa21.56■■□□□ 1.04
SCARB1-210ENST00000545493 FTSJ1Q9UET6 329 aa21.56■■□□□ 1.04
SCARB1-210ENST00000545493 FARP1Q9Y4F1 1045 aaPredicted RBP21.56■■□□□ 1.04
SCARB1-210ENST00000545493 A0A1W2PQU0 124 aa21.55■■□□□ 1.04
SCARB1-210ENST00000545493 YKT6O15498 198 aa21.55■■□□□ 1.04
SCARB1-210ENST00000545493 TNFSF14O43557 240 aa21.55■■□□□ 1.04
SCARB1-210ENST00000545493 RHOQP17081 205 aa21.55■■□□□ 1.04
SCARB1-210ENST00000545493 CDK11BP21127 795 aaKnown RBP21.55■■□□□ 1.04
SCARB1-210ENST00000545493 C1QBPQ07021 282 aaKnown RBP21.55■■□□□ 1.04
SCARB1-210ENST00000545493 SCAPQ12770 1279 aa21.55■■□□□ 1.04
SCARB1-210ENST00000545493 ANO6Q4KMQ2 910 aa21.55■■□□□ 1.04
SCARB1-210ENST00000545493 ARSIQ5FYB1 569 aa21.55■■□□□ 1.04
SCARB1-210ENST00000545493 CCNI2Q6ZMN8 369 aaPredicted RBP21.55■■□□□ 1.04
SCARB1-210ENST00000545493 PCDH20Q8N6Y1 951 aaKnown RBP21.55■■□□□ 1.04
SCARB1-210ENST00000545493 MFSD2AQ8NA29 543 aa21.55■■□□□ 1.04
SCARB1-210ENST00000545493 TBC1D31Q96DN5 1066 aa21.55■■□□□ 1.04
SCARB1-210ENST00000545493 MYOCQ99972 504 aa21.55■■□□□ 1.04
SCARB1-210ENST00000545493 SYT11Q9BT88 431 aa21.55■■□□□ 1.04
SCARB1-210ENST00000545493 DNAI1Q9UI46 699 aa21.55■■□□□ 1.04
SCARB1-210ENST00000545493 PKD1L2Q7Z442 2459 aa21.55■■□□□ 1.04
SCARB1-210ENST00000545493 TEX33O43247 280 aa21.54■■□□□ 1.04
SCARB1-210ENST00000545493 PRLRP16471 622 aa21.54■■□□□ 1.04
SCARB1-210ENST00000545493 CCNHP51946 323 aaPredicted RBP21.54■■□□□ 1.04
SCARB1-210ENST00000545493 PPP1R15BQ5SWA1 713 aa21.54■■□□□ 1.04
SCARB1-210ENST00000545493 DNAJC24Q6P3W2 148 aa21.54■■□□□ 1.04
SCARB1-210ENST00000545493 ERN2Q76MJ5 926 aaKnown RBP21.54■■□□□ 1.04
SCARB1-210ENST00000545493 TMPRSS7Q7RTY8 843 aa21.54■■□□□ 1.04
SCARB1-210ENST00000545493 IQCHQ86VS3 1027 aa21.54■■□□□ 1.04
SCARB1-210ENST00000545493 KLK6Q92876 244 aa21.54■■□□□ 1.04
SCARB1-210ENST00000545493 ARHGEF2Q92974 986 aaKnown RBP21.54■■□□□ 1.04
SCARB1-210ENST00000545493 VOPP1Q96AW1 172 aa21.54■■□□□ 1.04
SCARB1-210ENST00000545493 MCEEQ96PE7 176 aa21.54■■□□□ 1.04
SCARB1-210ENST00000545493 HDAC8Q9BY41 377 aa21.54■■□□□ 1.04
SCARB1-210ENST00000545493 TM6SF2Q9BZW4 377 aa21.54■■□□□ 1.04
SCARB1-210ENST00000545493 ERVMER34-1Q9H9K5 563 aa21.54■■□□□ 1.04
SCARB1-210ENST00000545493 FZD3Q9NPG1 666 aa21.54■■□□□ 1.04
SCARB1-210ENST00000545493 DYRK4Q9NR20 520 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms