RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 HS3ST3A1Q9Y663 406 aa9.63□□□□□ -0.87
CHD4-212ENST00000545083 TCAF2A6NFQ2 919 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 F5H5T6 163 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 H3BM21 787 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 K7ERQ8 282 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 TPP1O14773 563 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 YEATS4O95619 227 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 PAK4O96013 591 aaPredicted RBP9.62□□□□□ -0.87
CHD4-212ENST00000545083 LIPCP11150 499 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 SFTPCP11686 197 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 SRCP12931 536 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 JUNDP17535 347 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 BRD2P25440 801 aaKnown RBP9.62□□□□□ -0.87
CHD4-212ENST00000545083 CHRNA3P32297 505 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 INHBCP55103 352 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 CENPCQ03188 943 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 ADAM9Q13443 819 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 PDE1CQ14123 709 aaPredicted RBP9.62□□□□□ -0.87
CHD4-212ENST00000545083 SPIDRQ14159 915 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 SKIDA1Q1XH10 827 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 ZCWPW2Q504Y3 356 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 FBXL22Q6P050 247 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 ERN2Q76MJ5 926 aaKnown RBP9.62□□□□□ -0.87
CHD4-212ENST00000545083 RAB11FIP2Q7L804 512 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 BTN2A3PQ96KV6 586 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 PSMG3-AS1Q96PY0 264 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 KLF6Q99612 283 aaPredicted RBP9.62□□□□□ -0.87
CHD4-212ENST00000545083 FEM1AQ9BSK4 669 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 SLC17A9Q9BYT1 436 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 FOXP3Q9BZS1 431 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 GEMIN8Q9NWZ8 242 aaKnown RBP9.62□□□□□ -0.87
CHD4-212ENST00000545083 SEPT3Q9UH03 358 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 SLC25A13Q9UJS0 675 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 PCDHA7Q9UN72 937 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 MAPK8IP1Q9UQF2 711 aa9.62□□□□□ -0.87
CHD4-212ENST00000545083 TRPM6Q9BX84 2022 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 ICE1Q9Y2F5 2266 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 M0QYV0 167 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 RNF225M0QZC1 329 aaPredicted RBP9.61□□□□□ -0.87
CHD4-212ENST00000545083 AGRPO00253 132 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 SMAD6O43541 496 aaKnown RBP9.61□□□□□ -0.87
CHD4-212ENST00000545083 SNAP91O60641 907 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 FBXO21O94952 628 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 TRUB2O95900 331 aaKnown RBP9.61□□□□□ -0.87
CHD4-212ENST00000545083 IGLV3-25P01717 112 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 APOEP02649 317 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 ITIH1P19827 911 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 RRM1P23921 792 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 GGCXP38435 758 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 RABIFP47224 123 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 ADKP55263 362 aaKnown RBP9.61□□□□□ -0.87
CHD4-212ENST00000545083 NUCB2P80303 420 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 FOXK1P85037 733 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 LRMPQ12912 555 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 EIF4EBP2Q13542 120 aaPredicted RBP9.61□□□□□ -0.87
CHD4-212ENST00000545083 C4orf17Q53FE4 359 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 MANEAQ5SRI9 462 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 ZFAND4Q86XD8 727 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 CEP57L1Q8IYX8 460 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 TMIEQ8NEW7 156 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 WDR48Q8TAF3 677 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 FAM174AQ8TBP5 190 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 GRIN3AQ8TCU5 1115 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 NAT6Q93015 286 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 FAM149B1Q96BN6 582 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 HSFY1Q96LI6 401 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 ZNF396Q96N95 335 aaPredicted RBP9.61□□□□□ -0.87
CHD4-212ENST00000545083 PSMB7Q99436 277 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 LRRC61Q9BV99 259 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 HDAC8Q9BY41 377 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 CLPBQ9H078 707 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 FAM13BQ9NYF5 915 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 FOXJ2Q9P0K8 574 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 PISDQ9UG56 409 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 IPO11Q9UI26 975 aaKnown RBP9.61□□□□□ -0.87
CHD4-212ENST00000545083 VPS28Q9UK41 221 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 KIAA1257Q9ULG3 409 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 PADI4Q9UM07 663 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 HS3ST2Q9Y278 367 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 COQ4Q9Y3A0 265 aa9.61□□□□□ -0.87
CHD4-212ENST00000545083 ANKRD17O75179 2603 aaKnown RBP9.61□□□□□ -0.87
CHD4-212ENST00000545083 ITPR2Q14571 2701 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 PRAMEF33A0A0G2JMD5 474 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 A0A1W2PQM1 296 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 KCNU1A8MYU2 1149 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 D6RAR5 112 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 LMO7DNF2Z398 122 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 RIOK3O14730 519 aaKnown RBP9.6□□□□□ -0.87
CHD4-212ENST00000545083 NVLO15381 856 aaKnown RBP9.6□□□□□ -0.87
CHD4-212ENST00000545083 YY2O15391 372 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 PRAMEF10O60809 474 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 CELA2BP08218 269 aaPredicted RBP9.6□□□□□ -0.87
CHD4-212ENST00000545083 PRR29P0C7W0 189 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 ETV5P41161 510 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 RPL34P49207 117 aaKnown RBP9.6□□□□□ -0.87
CHD4-212ENST00000545083 RPIAP49247 311 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 PFN3P60673 137 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 EIF3IQ13347 325 aaKnown RBP9.6□□□□□ -0.87
CHD4-212ENST00000545083 CNGA2Q16280 664 aa9.6□□□□□ -0.87
CHD4-212ENST00000545083 FOXD4L6Q3SYB3 417 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms