RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 ZNF571Q7Z3V5 609 aaPredicted RBP7.57□□□□□ -1.2
CPSF7-224ENST00000544990 C14orf80Q86SX3 495 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 SETD3Q86TU7 594 aaPredicted RBP7.57□□□□□ -1.2
CPSF7-224ENST00000544990 CIR1Q86X95 450 aaPredicted RBP7.57□□□□□ -1.2
CPSF7-224ENST00000544990 TMEFF1Q8IYR6 380 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 APCDD1Q8J025 514 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 ZNF366Q8N895 744 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 C12orf50Q8NA57 414 aaPredicted RBP7.57□□□□□ -1.2
CPSF7-224ENST00000544990 JOSD2Q8TAC2 188 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 EPS8L3Q8TE67 593 aaKnown RBP7.57□□□□□ -1.2
CPSF7-224ENST00000544990 FAM172AQ8WUF8 416 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 CPLX3Q8WVH0 158 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 CENPIQ92674 756 aaPredicted RBP7.57□□□□□ -1.2
CPSF7-224ENST00000544990 SYN2Q92777 582 aaPredicted RBP7.57□□□□□ -1.2
CPSF7-224ENST00000544990 TRIM11Q96F44 468 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 FEM1AQ9BSK4 669 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 SYT11Q9BT88 431 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.57□□□□□ -1.2
CPSF7-224ENST00000544990 ZYG11BQ9C0D3 744 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 XPO4Q9C0E2 1151 aaKnown RBP7.57□□□□□ -1.2
CPSF7-224ENST00000544990 MKRN2Q9H000 416 aaKnown RBP7.57□□□□□ -1.2
CPSF7-224ENST00000544990 MUC3BQ9H195 1237 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 RETREG1Q9H6L5 497 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 PARD6AQ9NPB6 346 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 ITM2CQ9NQX7 267 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 VPS45Q9NRW7 570 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 PARVAQ9NVD7 372 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 OR12D3Q9UGF7 316 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 SLC25A13Q9UJS0 675 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 VPS28Q9UK41 221 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 CAPN11Q9UMQ6 739 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 CYP8B1Q9UNU6 501 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 TBC1D30Q9Y2I9 924 aa7.57□□□□□ -1.2
CPSF7-224ENST00000544990 ITIH6Q6UXX5 1313 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 EP300Q09472 2414 aaPredicted RBP7.56□□□□□ -1.2
CPSF7-224ENST00000544990 IGLV3-10A0A075B6K4 115 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 IGHV1OR15-9A0A0B4J2B8 117 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 EDDM13A0A1B0GTR0 161 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 E9PAM4 449 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 RNF8O76064 485 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 CNTN5O94779 1100 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 GJB6O95452 261 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 FTLP02792 175 aaPredicted RBP7.56□□□□□ -1.2
CPSF7-224ENST00000544990 SERPING1P05155 500 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 TPM1P09493 284 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 MYBL1P10243 752 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 SKILP12757 684 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 TGM1P22735 817 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 RRM1P23921 792 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 CD6P30203 668 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 OR1E1P30953 314 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 ADRA1BP35368 520 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 ID4P47928 161 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 COPAP53621 1224 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 AIF1P55008 147 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 NRG1Q02297 640 aaPredicted RBP7.56□□□□□ -1.2
CPSF7-224ENST00000544990 ZNF33AQ06730 810 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 TRIM14Q14142 442 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 HNRNPA1L2Q32P51 320 aaKnown RBP7.56□□□□□ -1.2
CPSF7-224ENST00000544990 TTC31Q49AM3 519 aaPredicted RBP7.56□□□□□ -1.2
CPSF7-224ENST00000544990 ACCSLQ4AC99 568 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 AASDHQ4L235 1098 aaPredicted RBP7.56□□□□□ -1.2
CPSF7-224ENST00000544990 ALFQ53S48 1182 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 SYCP2LQ5T4T6 812 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 LYSMD4Q5XG99 296 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 ZNF776Q68DI1 518 aaPredicted RBP7.56□□□□□ -1.2
CPSF7-224ENST00000544990 CXorf57Q6NSI4 855 aaKnown RBP7.56□□□□□ -1.2
CPSF7-224ENST00000544990 SCYL2Q6P3W7 929 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 RABEPKQ7Z6M1 372 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 SLFN11Q7Z7L1 901 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 FRMD1Q8N878 549 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 NANOS1Q8WY41 292 aaKnown RBP7.56□□□□□ -1.2
CPSF7-224ENST00000544990 PIGKQ92643 395 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 NTAN1Q96AB6 310 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 RPL10LQ96L21 214 aaKnown RBP7.56□□□□□ -1.2
CPSF7-224ENST00000544990 MRGPRX3Q96LB0 322 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 MCEEQ96PE7 176 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 SLC30A3Q99726 388 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 NCAPGQ9BPX3 1015 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 CNPY3Q9BT09 278 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 OSBPL2Q9H1P3 480 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 SLC6A17Q9H1V8 727 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 MRPL47Q9HD33 250 aaKnown RBP7.56□□□□□ -1.2
CPSF7-224ENST00000544990 PRSS16Q9NQE7 514 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 ANLNQ9NQW6 1124 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 TAS2R14Q9NYV8 317 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 MPP6Q9NZW5 540 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 USP36Q9P275 1121 aaKnown RBP7.56□□□□□ -1.2
CPSF7-224ENST00000544990 PPARGC1AQ9UBK2 798 aaKnown RBP7.56□□□□□ -1.2
CPSF7-224ENST00000544990 MBD1Q9UIS9 605 aaPredicted RBP7.56□□□□□ -1.2
CPSF7-224ENST00000544990 SCML1Q9UN30 329 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 NCKAP1Q9Y2A7 1128 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.56□□□□□ -1.2
CPSF7-224ENST00000544990 SCINQ9Y6U3 715 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 MUC22E2RYF6 1773 aaPredicted RBP7.56□□□□□ -1.2
CPSF7-224ENST00000544990 MYO15AQ9UKN7 3530 aa7.56□□□□□ -1.2
CPSF7-224ENST00000544990 TNRC6BQ9UPQ9 1833 aaKnown RBP7.55□□□□□ -1.2
CPSF7-224ENST00000544990 TCRBV5S1A1TA0A578 114 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 ILVBLA1L0T0 632 aa7.55□□□□□ -1.2
CPSF7-224ENST00000544990 TTC34A8MYJ7 566 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms