RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 ARRB2P32121 409 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 ADRA1AP35348 466 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 SLC26A3P40879 764 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 CPA2P48052 419 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 MTTPP55157 894 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 POU4F1Q01851 419 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 MGAT3Q09327 533 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 GALNT1Q10472 559 aaPredicted RBP12.65□□□□□ -0.38
PAAF1-215ENST00000544909 TUSC3Q13454 348 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 RFTN1Q14699 578 aaPredicted RBP12.65□□□□□ -0.38
PAAF1-215ENST00000544909 TIGD5Q53EQ6 642 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 CERCAMQ5T4B2 595 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 SEL1L3Q68CR1 1132 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 TRIM68Q6AZZ1 485 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 C16orf89Q6UX73 402 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 ACAD11Q709F0 780 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 ARHGAP12Q8IWW6 846 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 CNTD1Q8N815 330 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 TDRD5Q8NAT2 981 aaKnown RBP12.65□□□□□ -0.38
PAAF1-215ENST00000544909 PIP4K2CQ8TBX8 421 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 SERPINB11Q96P15 392 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 AGAP2Q99490 1192 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 RTP3Q9BQQ7 232 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 SPC25Q9HBM1 224 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 TRPC7Q9HCX4 862 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 S100A14Q9HCY8 104 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 CHRAC1Q9NRG0 131 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 TMEM30AQ9NV96 361 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 PNPOQ9NVS9 261 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 OSER1Q9NX31 292 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 PDP2Q9P2J9 529 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 SUFUQ9UMX1 484 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 ACOT9Q9Y305 439 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 TCAF1Q9Y4C2 921 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 PTPRDP23468 1912 aa12.65□□□□□ -0.38
PAAF1-215ENST00000544909 RGSL1A5PLK6 1076 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 CASQ2O14958 399 aaPredicted RBP12.65□□□□□ -0.39
PAAF1-215ENST00000544909 ATP9BO43861 1147 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 MAFKO60675 156 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 SLC35E2BP0CK96 405 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 PIM1P11309 404 aaPredicted RBP12.65□□□□□ -0.39
PAAF1-215ENST00000544909 INHBEP58166 350 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 RAB10P61026 200 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 BTG3Q14201 252 aaPredicted RBP12.65□□□□□ -0.39
PAAF1-215ENST00000544909 PRAMEF19Q5SWL8 479 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 MSANTD2Q6P1R3 559 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 C17orf99Q6UX52 265 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 DHDDSQ86SQ9 333 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 TP53INP2Q8IXH6 220 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 PLD6Q8N2A8 252 aaKnown RBP12.65□□□□□ -0.39
PAAF1-215ENST00000544909 ARHGAP18Q8N392 663 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 FBXW8Q8N3Y1 598 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 TMEM151AQ8N4L1 468 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 C3orf58Q8NDZ4 430 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 FBXO27Q8NI29 283 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 GATA6Q92908 595 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 SPDL1Q96EA4 605 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 FUBP3Q96I24 572 aaKnown RBP eCLIP12.65□□□□□ -0.39
PAAF1-215ENST00000544909 SUSD3Q96L08 255 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 MRPL57Q9BQC6 102 aaKnown RBP12.65□□□□□ -0.39
PAAF1-215ENST00000544909 GATA5Q9BWX5 397 aaPredicted RBP12.65□□□□□ -0.39
PAAF1-215ENST00000544909 FAM192AQ9GZU8 254 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 MRPL46Q9H2W6 279 aaKnown RBP12.65□□□□□ -0.39
PAAF1-215ENST00000544909 ZNF408Q9H9D4 720 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 TREX1Q9NSU2 369 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 IL1RAPL1Q9NZN1 696 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 STK39Q9UEW8 545 aa12.65□□□□□ -0.39
PAAF1-215ENST00000544909 TRPM7Q96QT4 1865 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 TRPC5OSA6NMA1 111 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 USP12O75317 370 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 COX4I1P13073 169 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 STMN1P16949 149 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 PPARGP37231 505 aaPredicted RBP12.64□□□□□ -0.39
PAAF1-215ENST00000544909 ARCN1P48444 511 aaKnown RBP12.64□□□□□ -0.39
PAAF1-215ENST00000544909 SCNN1GP51170 649 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 CACNA2D1P54289 1103 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 SESN3P58005 492 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 KLF10Q13118 480 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 LAMB3Q13751 1172 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 USP10Q14694 798 aaKnown RBP12.64□□□□□ -0.39
PAAF1-215ENST00000544909 SLC14A2Q15849 920 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 ZFP1Q6P2D0 407 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 CES3Q6UWW8 571 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 RANBP10Q6VN20 620 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 AFAP1L2Q8N4X5 818 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 ZNF781Q8N8C0 355 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 RTL3Q8N8U3 475 aaKnown RBP12.64□□□□□ -0.39
PAAF1-215ENST00000544909 C2CD4AQ8NCU7 369 aaPredicted RBP12.64□□□□□ -0.39
PAAF1-215ENST00000544909 ADAM32Q8TC27 787 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 RNF34Q969K3 372 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 PPP2R3CQ969Q6 453 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 TRAPPC9Q96Q05 1148 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 ZNF385DQ9H6B1 395 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 RETREG1Q9H6L5 497 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 TASP1Q9H6P5 420 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 MRPL40Q9NQ50 206 aaKnown RBP12.64□□□□□ -0.39
PAAF1-215ENST00000544909 IARS2Q9NSE4 1012 aaKnown RBP12.64□□□□□ -0.39
PAAF1-215ENST00000544909 PIH1D1Q9NWS0 290 aaKnown RBP12.64□□□□□ -0.39
PAAF1-215ENST00000544909 NCKIPSDQ9NZQ3 722 aa12.64□□□□□ -0.39
PAAF1-215ENST00000544909 CLEC11AQ9Y240 323 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms