RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 ZFYVE27Q5T4F4 411 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 C9orf64Q5T6V5 341 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 TMEM215Q68D42 235 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 KIAA0895LQ68EN5 471 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 FBXL19Q6PCT2 694 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 WDR59Q6PJI9 974 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 IRF2BP2Q7Z5L9 587 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 TFAP2DQ7Z6R9 452 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 FAM124AQ86V42 546 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 DCP2Q8IU60 420 aaKnown RBP5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 ABCA7Q8IZY2 2146 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 NDUFAF2Q8N183 169 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 SH2D3CQ8N5H7 860 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 EMC1Q8N766 993 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 CPLX3Q8WVH0 158 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 CTNNBL1Q8WYA6 563 aaPredicted RBP5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 IGSF8Q969P0 613 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 RAB7BQ96AH8 199 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 CALR3Q96L12 384 aaKnown RBP5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 CCDC42Q96M95 316 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 BBC3Q96PG8 261 aaPredicted RBP5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 HEPHQ9BQS7 1158 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 AASDHPPTQ9NRN7 309 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 POLR3BQ9NW08 1133 aaPredicted RBP5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 TMEM248Q9NWD8 314 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 KCTD5Q9NXV2 234 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 CNOT8Q9UFF9 292 aaKnown RBP5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 IL36AQ9UHA7 158 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 IP6K2Q9UHH9 426 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 XPO7Q9UIA9 1087 aaKnown RBP5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 MBD1Q9UIS9 605 aaPredicted RBP5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 AJAP1Q9UKB5 411 aaPredicted RBP5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 GPSM3Q9Y4H4 160 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 PCDHGB2Q9Y5G2 931 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 THADAQ6YHU6 1953 aa5.73□□□□□ -1.49
CLSTN3-215ENST00000544584 HECTD1Q9ULT8 2610 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 KALRNO60229 2985 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 A0A1W2PP55 124 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 A0A1W2PPC4 97 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 A0A1W2PQ67 120 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 TMCO5BA8MYB1 307 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 H3BRJ5 948 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 EEF2KO00418 725 aaKnown RBP5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 TOR1BO14657 336 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 EPHB6O15197 1021 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 MID1O15344 667 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 FLRT2O43155 660 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 BUB1O43683 1085 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 LRIG2O94898 1065 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 IGSF6O95976 241 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 GSRP00390 522 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 KRT7P08729 469 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 H2AFZP0C0S5 128 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 CHRNB2P17787 502 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 CA4P22748 312 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 CES1P23141 567 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 RRM1P23921 792 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 CD38P28907 300 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 AKT2P31751 481 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 SSR1P43307 286 aaKnown RBP5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 HCAR3P49019 387 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 SERPINH1P50454 418 aaKnown RBP5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 CCT8P50990 548 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 NOVA1P51513 510 aaKnown RBP5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 NEK3P51956 506 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 NDST2P52849 883 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 POLR2LP62875 67 aaKnown RBP5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 RPS21P63220 83 aaKnown RBP5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 MAMLD1Q13495 774 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 RFTN1Q14699 578 aaPredicted RBP5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 CCDC6Q16204 474 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 ZNF423Q2M1K9 1284 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 C15orf59Q2T9L4 293 aaPredicted RBP5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 C2CD6Q53TS8 623 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 CARD16Q5EG05 197 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 PLEKHA7Q6IQ23 1121 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 CXorf57Q6NSI4 855 aaKnown RBP5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 KIAA1161Q6NSJ0 714 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 ALKBH5Q6P6C2 394 aaKnown RBP5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 H2AFVQ71UI9 128 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 APTXQ7Z2E3 356 aaKnown RBP5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 BNIPLQ7Z465 357 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 IQCHQ86VS3 1027 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 TRIM69Q86WT6 500 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 CIR1Q86X95 450 aaPredicted RBP5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 DNAAF5Q86Y56 855 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 APCDD1Q8J025 514 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 STK40Q8N2I9 435 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 RYBPQ8N488 228 aaPredicted RBP5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 MINDY1Q8N5J2 469 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 ATL2Q8NHH9 583 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 PIP4K2CQ8TBX8 421 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 WFDC5Q8TCV5 224 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 HCAR2Q8TDS4 363 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 BAP1Q92560 729 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 PTPRN2Q92932 1015 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 SERAC1Q96JX3 654 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 LMLNQ96KR4 655 aa5.72□□□□□ -1.49
CLSTN3-215ENST00000544584 GDAP1L1Q96MZ0 367 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms