RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-220	ENST00000544550	PRAMEF14	Q5SWL7	426 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	FOXB2	Q5VYV0	432 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	ZNF776	Q68DI1	518 aa	Predicted RBP	4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	ADAL	Q6DHV7	355 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	POMZP3	Q6PJE2	187 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	TADA2B	Q86TJ2	420 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	IQCH	Q86VS3	1027 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	OSTM1	Q86WC4	334 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	TRIM59	Q8IWR1	403 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	DIS3L2	Q8IYB7	885 aa	Known RBP	4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	ADCY4	Q8NFM4	1077 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	WDR36	Q8NI36	951 aa	Known RBP	4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	WDR48	Q8TAF3	677 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	ZNF564	Q8TBZ8	553 aa	Predicted RBP	4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	KISS1R	Q969F8	398 aa	Predicted RBP	4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	PCED1B	Q96HM7	432 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	ORAI3	Q9BRQ5	295 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	AARSD1	Q9BTE6	412 aa	Known RBP	4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	LGR4	Q9BXB1	951 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	OSBPL1A	Q9BXW6	950 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	HDAC8	Q9BY41	377 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	SLC2A11	Q9BYW1	496 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	CIPC	Q9C0C6	399 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	TLR8	Q9NR97	1041 aa	Known RBP	4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	ELOVL2	Q9NXB9	296 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	NCKIPSD	Q9NZQ3	722 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	SEPT10	Q9P0V9	454 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	TUBD1	Q9UJT1	453 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	ANAPC2	Q9UJX6	822 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	AGO2	Q9UKV8	859 aa	Known RBP	4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	PLA2G4C	Q9UP65	541 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	SATB2	Q9UPW6	733 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	CYP46A1	Q9Y6A2	500 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	UNC79	Q9P2D8	2635 aa		4.27	□□□□□ -1.73
SNHG1-220	ENST00000544550	TRAV20	A0A0B4J274	112 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550		A0A1W2PR77	199 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	NEMP2	A6NFY4	417 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	FAM47DP	A6NHR8	397 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	PRR19	A6NJB7	356 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	TBX1	O43435	398 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	TLR5	O60602	858 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	CLSTN1	O94985	981 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	LDHA	P00338	332 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	PENK	P01210	267 aa	Predicted RBP	4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	WNT1	P04628	370 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	ITGA2B	P08514	1039 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	FAM163B	P0C2L3	166 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	TMEM191B	P0C7N4	346 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	ZDHHC11B	P0C7U3	371 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	THEGL	P0DJG4	465 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	WARS	P23381	471 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	PRKCH	P24723	683 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	HARS2	P49590	506 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	CCR5	P51681	352 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	SLC5A3	P53794	718 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	BNIP3	Q12983	259 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	EIF3I	Q13347	325 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	GEN1	Q17RS7	908 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	ISX	Q2M1V0	245 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	FNDC3B	Q53EP0	1204 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	BMP2KL	Q5H9B9	411 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	MDH1B	Q5I0G3	518 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	NAPEPLD	Q6IQ20	393 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	KLHDC10	Q6PID8	442 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	ZDHHC13	Q8IUH4	622 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	SCUBE1	Q8IWY4	988 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	CSGALNACT2	Q8N6G5	542 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	IGSF22	Q8N9C0	903 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	SYT2	Q8N9I0	419 aa	Predicted RBP	4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	OR2T34	Q8NGX1	318 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	OR4C6	Q8NH72	309 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	MAPK15	Q8TD08	544 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	GANC	Q8TET4	914 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	WFIKKN2	Q8TEU8	576 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	POMGNT1	Q8WZA1	660 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	PPP1R14A	Q96A00	147 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	ANKRD36BP1	Q96IX9	119 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	SERAC1	Q96JX3	654 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	EXOC2	Q96KP1	924 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	CDK5RAP1	Q96SZ6	601 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	DHRS4	Q9BTZ2	278 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	SNX25	Q9H3E2	840 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	FBXO44	Q9H4M3	255 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	NOL6	Q9H6R4	1146 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	PARVG	Q9HBI0	331 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	CRTAC1	Q9NQ79	661 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	GJB4	Q9NTQ9	266 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	PCMTD2	Q9NV79	361 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	PLK2	Q9NYY3	685 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	SUN2	Q9UH99	717 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	CHORDC1	Q9UHD1	332 aa	Predicted RBP	4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	ACSL6	Q9UKU0	697 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	FZD4	Q9ULV1	537 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	SF3B6	Q9Y3B4	125 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	PCDHGA7	Q9Y5G6	932 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	STYXL1	Q9Y6J8	313 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	HELZ	P42694	1942 aa	Known RBP	4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	ATG2B	Q96BY7	2078 aa		4.26	□□□□□ -1.73
SNHG1-220	ENST00000544550	CCDC187	A0A096LP49	1063 aa		4.25	□□□□□ -1.73

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