RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 AGKQ53H12 422 aa13.03□□□□□ -0.32
PDZD4-209ENST00000544474 DCLRE1AQ6PJP8 1040 aa13.03□□□□□ -0.32
PDZD4-209ENST00000544474 PID1Q7Z2X4 250 aa13.03□□□□□ -0.32
PDZD4-209ENST00000544474 C12orf29Q8N999 325 aa13.03□□□□□ -0.32
PDZD4-209ENST00000544474 SPERTQ8NA61 448 aa13.03□□□□□ -0.32
PDZD4-209ENST00000544474 CPB2Q96IY4 423 aa13.03□□□□□ -0.32
PDZD4-209ENST00000544474 SNX25Q9H3E2 840 aa13.03□□□□□ -0.32
PDZD4-209ENST00000544474 NOL6Q9H6R4 1146 aaKnown RBP13.03□□□□□ -0.32
PDZD4-209ENST00000544474 PTGES3LE9PB15 166 aa13.02□□□□□ -0.32
PDZD4-209ENST00000544474 GUCY1B2O75343 617 aa13.02□□□□□ -0.32
PDZD4-209ENST00000544474 SPAG6O75602 509 aa13.02□□□□□ -0.32
PDZD4-209ENST00000544474 JUNP05412 331 aaKnown RBP13.02□□□□□ -0.32
PDZD4-209ENST00000544474 PCNAP12004 261 aa13.02□□□□□ -0.32
PDZD4-209ENST00000544474 PRKACBP22694 351 aa13.02□□□□□ -0.32
PDZD4-209ENST00000544474 ABCE1P61221 599 aaKnown RBP13.02□□□□□ -0.32
PDZD4-209ENST00000544474 PRKCEQ02156 737 aa13.02□□□□□ -0.32
PDZD4-209ENST00000544474 SLC10A2Q12908 348 aaPredicted RBP13.02□□□□□ -0.32
PDZD4-209ENST00000544474 CA9Q16790 459 aa13.02□□□□□ -0.32
PDZD4-209ENST00000544474 KIF19Q2TAC6 998 aa13.02□□□□□ -0.32
PDZD4-209ENST00000544474 ATG14Q6ZNE5 492 aa13.02□□□□□ -0.32
PDZD4-209ENST00000544474 C15orf39Q6ZRI6 1047 aa13.02□□□□□ -0.32
PDZD4-209ENST00000544474 ITIH5Q86UX2 942 aa13.02□□□□□ -0.32
PDZD4-209ENST00000544474 KIAA2013Q8IYS2 634 aa13.02□□□□□ -0.32
PDZD4-209ENST00000544474 GOLM1Q8NBJ4 401 aa13.02□□□□□ -0.32
PDZD4-209ENST00000544474 PHF21BQ96EK2 531 aa13.02□□□□□ -0.32
PDZD4-209ENST00000544474 PDCD2LQ9BRP1 358 aa13.02□□□□□ -0.32
PDZD4-209ENST00000544474 HERC2P3Q9BVR0 1158 aa13.02□□□□□ -0.32
PDZD4-209ENST00000544474 B3GNT5Q9BYG0 378 aa13.02□□□□□ -0.32
PDZD4-209ENST00000544474 ZFYVE28Q9HCC9 887 aa13.02□□□□□ -0.32
PDZD4-209ENST00000544474 PCDHGA3Q9Y5H0 932 aa13.02□□□□□ -0.32
PDZD4-209ENST00000544474 NEMP2A6NFY4 417 aa13.02□□□□□ -0.33
PDZD4-209ENST00000544474 PAPSS1O43252 624 aaPredicted RBP13.02□□□□□ -0.33
PDZD4-209ENST00000544474 SULT1C4O75897 302 aa13.02□□□□□ -0.33
PDZD4-209ENST00000544474 ME2P23368 584 aa13.02□□□□□ -0.33
PDZD4-209ENST00000544474 ARRB2P32121 409 aa13.02□□□□□ -0.33
PDZD4-209ENST00000544474 ALDH3B2P48448 385 aa13.02□□□□□ -0.33
PDZD4-209ENST00000544474 MADCAM1Q13477 382 aa13.02□□□□□ -0.33
PDZD4-209ENST00000544474 HEATR6Q6AI08 1181 aaKnown RBP13.02□□□□□ -0.33
PDZD4-209ENST00000544474 RFPL4BQ6ZWI9 263 aa13.02□□□□□ -0.33
PDZD4-209ENST00000544474 MAVSQ7Z434 540 aa13.02□□□□□ -0.33
PDZD4-209ENST00000544474 STRA8Q7Z7C7 330 aa13.02□□□□□ -0.33
PDZD4-209ENST00000544474 GPR180Q86V85 440 aa13.02□□□□□ -0.33
PDZD4-209ENST00000544474 OR9I1Q8NGQ6 314 aa13.02□□□□□ -0.33
PDZD4-209ENST00000544474 KLHL32Q96NJ5 620 aa13.02□□□□□ -0.33
PDZD4-209ENST00000544474 IFT52Q9Y366 437 aa13.02□□□□□ -0.33
PDZD4-209ENST00000544474 AP4S1Q9Y587 144 aa13.02□□□□□ -0.33
PDZD4-209ENST00000544474 COL24A1Q17RW2 1714 aa13.02□□□□□ -0.33
PDZD4-209ENST00000544474 WNK3Q9BYP7 1800 aa13.02□□□□□ -0.33
PDZD4-209ENST00000544474 C7orf72A4D263 438 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 SPDYE2BA6NHP3 402 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 SERPINE1P05121 402 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 SPDYE6P0CI01 402 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 CD247P20963 164 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 TTC30AQ86WT1 665 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 MMAAQ8IVH4 418 aaKnown RBP13.01□□□□□ -0.33
PDZD4-209ENST00000544474 MAGEE2Q8TD90 523 aaPredicted RBP13.01□□□□□ -0.33
PDZD4-209ENST00000544474 FBXL20Q96IG2 436 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 C7orf26Q96N11 449 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 CGRRF1Q99675 332 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 LPIN3Q9BQK8 851 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 ING2Q9H160 280 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 HIPK3Q9H422 1215 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 AASDHPPTQ9NRN7 309 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 TLK1Q9UKI8 766 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 ERGIC3Q9Y282 383 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 PSMD11O00231 422 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 FPGSQ05932 587 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 CXCL9Q07325 125 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 MOGQ16653 247 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 SETD3Q86TU7 594 aaPredicted RBP13.01□□□□□ -0.33
PDZD4-209ENST00000544474 FAM20CQ8IXL6 584 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 NIM1KQ8IY84 436 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 TBC1D15Q8TC07 691 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 MZB1Q8WU39 189 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 NDRG1Q92597 394 aaKnown RBP13.01□□□□□ -0.33
PDZD4-209ENST00000544474 RNF38Q9H0F5 515 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 HMGXB4Q9UGU5 601 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 ARIH1Q9Y4X5 557 aaPredicted RBP13.01□□□□□ -0.33
PDZD4-209ENST00000544474 SF3B1O75533 1304 aaKnown RBP eCLIP13.01□□□□□ -0.33
PDZD4-209ENST00000544474 H6PDO95479 791 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 LSM8O95777 96 aaKnown RBP13.01□□□□□ -0.33
PDZD4-209ENST00000544474 ASNSP08243 561 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 BMXP51813 675 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 SLC18A2Q05940 514 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 LSM12Q3MHD2 195 aaKnown RBP13.01□□□□□ -0.33
PDZD4-209ENST00000544474 TMTC4Q5T4D3 741 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 CBR4Q8N4T8 237 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 LILRB4Q8NHJ6 448 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 SLC7A3Q8WY07 619 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 DHRS4Q9BTZ2 278 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 FRMD8P1Q9BZ68 369 aaPredicted RBP13.01□□□□□ -0.33
PDZD4-209ENST00000544474 ATXN3LQ9H3M9 355 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 CXorf21Q9HAI6 301 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 TMPRSS4Q9NRS4 437 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 GIMAP2Q9UG22 337 aa13.01□□□□□ -0.33
PDZD4-209ENST00000544474 APOC4-APOC2K7ER74 178 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 WNT10BO00744 389 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 KMOO15229 486 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 APOC2P02655 101 aa13□□□□□ -0.33
PDZD4-209ENST00000544474 DHRS4L1P0CG22 281 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms