RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 UBA2Q9UBT2 640 aaPredicted RBP30.98■■■□□ 2.55
CCM2-219ENST00000544363 CSKP41240 450 aa30.97■■■□□ 2.55
CCM2-219ENST00000544363 GPS2Q13227 327 aa30.97■■■□□ 2.55
CCM2-219ENST00000544363 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP30.97■■■□□ 2.55
CCM2-219ENST00000544363 OR2W6PQ8NHA6 318 aa30.97■■■□□ 2.55
CCM2-219ENST00000544363 SMARCD2Q92925 531 aa30.97■■■□□ 2.55
CCM2-219ENST00000544363 IRF7Q92985 503 aa30.97■■■□□ 2.55
CCM2-219ENST00000544363 ALG14Q96F25 216 aa30.97■■■□□ 2.55
CCM2-219ENST00000544363 LRRC3BQ96PB8 259 aa30.97■■■□□ 2.55
CCM2-219ENST00000544363 WDR83Q9BRX9 315 aaKnown RBP30.97■■■□□ 2.55
CCM2-219ENST00000544363 SPHK2Q9NRA0 654 aa30.97■■■□□ 2.55
CCM2-219ENST00000544363 WNT6Q9Y6F9 365 aa30.97■■■□□ 2.55
CCM2-219ENST00000544363 TMEM265A0A087WTH1 108 aa30.96■■■□□ 2.55
CCM2-219ENST00000544363 CBX4O00257 560 aa30.96■■■□□ 2.55
CCM2-219ENST00000544363 PENKP01210 267 aaPredicted RBP30.96■■■□□ 2.55
CCM2-219ENST00000544363 SPARCL1Q14515 664 aa30.96■■■□□ 2.55
CCM2-219ENST00000544363 RFTN1Q14699 578 aaPredicted RBP30.96■■■□□ 2.55
CCM2-219ENST00000544363 FBXO36Q8NEA4 188 aa30.96■■■□□ 2.55
CCM2-219ENST00000544363 SPATA22Q8NHS9 363 aa30.96■■■□□ 2.55
CCM2-219ENST00000544363 TTYH1Q9H313 450 aaPredicted RBP30.96■■■□□ 2.55
CCM2-219ENST00000544363 LRRC40Q9H9A6 602 aa30.96■■■□□ 2.55
CCM2-219ENST00000544363 UBP1Q9NZI7 540 aa30.96■■■□□ 2.55
CCM2-219ENST00000544363 KIAA1522Q9P206 1035 aaPredicted RBP30.96■■■□□ 2.55
CCM2-219ENST00000544363 VPS28Q9UK41 221 aa30.96■■■□□ 2.55
CCM2-219ENST00000544363 CLEC4EQ9ULY5 219 aa30.96■■■□□ 2.55
CCM2-219ENST00000544363 TEX264Q9Y6I9 313 aa30.96■■■□□ 2.55
CCM2-219ENST00000544363 VIPR2P41587 438 aa30.95■■■□□ 2.55
CCM2-219ENST00000544363 ELK3P41970 407 aa30.95■■■□□ 2.55
CCM2-219ENST00000544363 GEMP55040 296 aa30.95■■■□□ 2.55
CCM2-219ENST00000544363 EIF3BP55884 814 aaKnown RBP30.95■■■□□ 2.55
CCM2-219ENST00000544363 ZNF235Q14590 738 aa30.95■■■□□ 2.55
CCM2-219ENST00000544363 CCDC38Q502W7 563 aa30.95■■■□□ 2.55
CCM2-219ENST00000544363 ATAT1Q5SQI0 421 aa30.95■■■□□ 2.55
CCM2-219ENST00000544363 ADGRG2Q8IZP9 1017 aa30.95■■■□□ 2.55
CCM2-219ENST00000544363 BBS5Q8N3I7 341 aa30.95■■■□□ 2.55
CCM2-219ENST00000544363 LRRC39Q96DD0 335 aa30.95■■■□□ 2.55
CCM2-219ENST00000544363 RSPRY1Q96DX4 576 aa30.95■■■□□ 2.55
CCM2-219ENST00000544363 LRRC4CQ9HCJ2 640 aa30.95■■■□□ 2.55
CCM2-219ENST00000544363 DYNC1LI1Q9Y6G9 523 aaKnown RBP30.95■■■□□ 2.55
CCM2-219ENST00000544363 ZMPSTE24O75844 475 aa30.95■■■□□ 2.54
CCM2-219ENST00000544363 ITKQ08881 620 aa30.95■■■□□ 2.54
CCM2-219ENST00000544363 AGGF1Q8N302 714 aaeCLIP30.95■■■□□ 2.54
CCM2-219ENST00000544363 PGBD5Q8N414 524 aa30.95■■■□□ 2.54
CCM2-219ENST00000544363 UHMK1Q8TAS1 419 aaKnown RBP30.95■■■□□ 2.54
CCM2-219ENST00000544363 S1PR5Q9H228 398 aa30.95■■■□□ 2.54
CCM2-219ENST00000544363 SEPT3Q9UH03 358 aa30.95■■■□□ 2.54
CCM2-219ENST00000544363 MTCH2Q9Y6C9 303 aa30.95■■■□□ 2.54
CCM2-219ENST00000544363 MT-CYBP00156 380 aaPredicted RBP30.94■■■□□ 2.54
CCM2-219ENST00000544363 SHBGP04278 402 aa30.94■■■□□ 2.54
CCM2-219ENST00000544363 ABHD2P08910 425 aa30.94■■■□□ 2.54
CCM2-219ENST00000544363 MAXP61244 160 aa30.94■■■□□ 2.54
CCM2-219ENST00000544363 ARF5P84085 180 aa30.94■■■□□ 2.54
CCM2-219ENST00000544363 LMAN2Q12907 356 aa30.94■■■□□ 2.54
CCM2-219ENST00000544363 GRIN2CQ14957 1233 aa30.94■■■□□ 2.54
CCM2-219ENST00000544363 CTC1Q2NKJ3 1217 aa30.94■■■□□ 2.54
CCM2-219ENST00000544363 CES5AQ6NT32 575 aa30.94■■■□□ 2.54
CCM2-219ENST00000544363 IGDCC3Q8IVU1 814 aa30.94■■■□□ 2.54
CCM2-219ENST00000544363 DCAF4L2Q8NA75 395 aa30.94■■■□□ 2.54
CCM2-219ENST00000544363 IMP4Q96G21 291 aaKnown RBP30.94■■■□□ 2.54
CCM2-219ENST00000544363 SIGLEC10Q96LC7 697 aa30.94■■■□□ 2.54
CCM2-219ENST00000544363 BBS2Q9BXC9 721 aa30.94■■■□□ 2.54
CCM2-219ENST00000544363 TRPV4Q9HBA0 871 aa30.94■■■□□ 2.54
CCM2-219ENST00000544363 HAUS2Q9NVX0 235 aa30.94■■■□□ 2.54
CCM2-219ENST00000544363 CHMP2BQ9UQN3 213 aa30.94■■■□□ 2.54
CCM2-219ENST00000544363 ACTL7AQ9Y615 435 aa30.94■■■□□ 2.54
CCM2-219ENST00000544363 SNAP91O60641 907 aa30.93■■■□□ 2.54
CCM2-219ENST00000544363 ZNF844Q08AG5 666 aa30.93■■■□□ 2.54
CCM2-219ENST00000544363 IFFO1Q0D2I5 559 aa30.93■■■□□ 2.54
CCM2-219ENST00000544363 LY6G5CQ5SRR4 150 aa30.93■■■□□ 2.54
CCM2-219ENST00000544363 ATP11CQ8NB49 1132 aa30.93■■■□□ 2.54
CCM2-219ENST00000544363 SH3GL2Q99962 352 aa30.93■■■□□ 2.54
CCM2-219ENST00000544363 POLR1EQ9GZS1 481 aaKnown RBP30.93■■■□□ 2.54
CCM2-219ENST00000544363 CASS4Q9NQ75 786 aa30.93■■■□□ 2.54
CCM2-219ENST00000544363 MARK1Q9P0L2 795 aa30.93■■■□□ 2.54
CCM2-219ENST00000544363 CDH7Q9ULB5 785 aa30.93■■■□□ 2.54
CCM2-219ENST00000544363 PRRC2BQ5JSZ5 2229 aaKnown RBP30.92■■■□□ 2.54
CCM2-219ENST00000544363 NEDD8-MDP1E9PL57 170 aa30.92■■■□□ 2.54
CCM2-219ENST00000544363 OPA1O60313 960 aa30.92■■■□□ 2.54
CCM2-219ENST00000544363 TBX10O75333 385 aa30.92■■■□□ 2.54
CCM2-219ENST00000544363 NIPAL4Q0D2K0 466 aa30.92■■■□□ 2.54
CCM2-219ENST00000544363 OLIG2Q13516 323 aa30.92■■■□□ 2.54
CCM2-219ENST00000544363 CEP85LQ5SZL2 805 aa30.92■■■□□ 2.54
CCM2-219ENST00000544363 NAPEPLDQ6IQ20 393 aa30.92■■■□□ 2.54
CCM2-219ENST00000544363 LINC00523Q86TU6 105 aa30.92■■■□□ 2.54
CCM2-219ENST00000544363 PRPF39Q86UA1 669 aaKnown RBP30.92■■■□□ 2.54
CCM2-219ENST00000544363 PALM2Q8IXS6 379 aa30.92■■■□□ 2.54
CCM2-219ENST00000544363 APCDD1Q8J025 514 aa30.92■■■□□ 2.54
CCM2-219ENST00000544363 BPIFB1Q8TDL5 484 aa30.92■■■□□ 2.54
CCM2-219ENST00000544363 OSCP1Q8WVF1 389 aa30.92■■■□□ 2.54
CCM2-219ENST00000544363 LMLNQ96KR4 655 aa30.92■■■□□ 2.54
CCM2-219ENST00000544363 DUS2Q9NX74 493 aaKnown RBP30.92■■■□□ 2.54
CCM2-219ENST00000544363 OBP2AQ9NY56 170 aa30.92■■■□□ 2.54
CCM2-219ENST00000544363 USP12O75317 370 aa30.91■■■□□ 2.54
CCM2-219ENST00000544363 SYF2O95926 243 aaKnown RBP30.91■■■□□ 2.54
CCM2-219ENST00000544363 TSHRP16473 764 aa30.91■■■□□ 2.54
CCM2-219ENST00000544363 DSC2Q02487 901 aa30.91■■■□□ 2.54
CCM2-219ENST00000544363 DLX2Q07687 328 aaPredicted RBP30.91■■■□□ 2.54
CCM2-219ENST00000544363 MPP3Q13368 585 aa30.91■■■□□ 2.54
CCM2-219ENST00000544363 SLC12A1Q13621 1099 aa30.91■■■□□ 2.54
CCM2-219ENST00000544363 OR52K1Q8NGK4 314 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms