RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 MTG2Q9H4K7 406 aa14.75□□□□□ -0.05
TNFRSF1A-216ENST00000543995 C2orf42Q9NWW7 574 aa14.75□□□□□ -0.05
TNFRSF1A-216ENST00000543995 KMT2EQ8IZD2 1858 aa14.75□□□□□ -0.05
TNFRSF1A-216ENST00000543995 CKAP5Q14008 2032 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 TCRBV21S2A2A0A5A6 115 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 TARSL2A2RTX5 802 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 LAMTOR5O43504 91 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 SIN3BO75182 1162 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 NEBLO76041 1014 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 FGGP02679 453 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 VAV1P15498 845 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 CCNCP24863 283 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 CASQ1P31415 396 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 RECQLP46063 649 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 DGKEP52429 567 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 RHOAP61586 193 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 OTUD4Q01804 1114 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 SATB1Q01826 763 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 PPIDQ08752 370 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 LBRQ14739 615 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 INO80DQ53TQ3 878 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 TMCO4Q5TGY1 634 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 KIAA1211LQ6NV74 962 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 Q6ZVU0 165 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 C1orf210Q8IVY1 113 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 CCDC13Q8IYE1 715 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 BBS5Q8N3I7 341 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 TTC13Q8NBP0 860 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 TSTD1Q8NFU3 115 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 ACTL9Q8TC94 416 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 FRS2Q8WU20 508 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 CCDC114Q96M63 670 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 C16orf45Q96MC5 204 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 ZNF599Q96NL3 588 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 HHIPQ96QV1 700 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 LGMNQ99538 433 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 CINPQ9BW66 212 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 TM6SF2Q9BZW4 377 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 PRSS16Q9NQE7 514 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 SNX12Q9UMY4 172 aa14.74□□□□□ -0.05
TNFRSF1A-216ENST00000543995 A0A1W2PQF6 199 aa14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 TCRBV7S2A1N4TA0A589 114 aa14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 H7C0C1 242 aa14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 MCF2LO15068 1137 aa14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 COL9A1P20849 921 aa14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 ATP5OP48047 213 aa14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 ETF1P62495 437 aaKnown RBP14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 SLC10A7Q0GE19 358 aa14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 KLF1Q13351 362 aaPredicted RBP14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 CAMK2GQ13555 558 aaPredicted RBP14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 ZNF235Q14590 738 aa14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 RFTN1Q14699 578 aaPredicted RBP14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 NOMO1Q15155 1222 aa14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 LONRF2Q1L5Z9 754 aa14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 MARC1Q5VT66 337 aa14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 SYT10Q6XYQ8 523 aa14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 B4GALNT4Q76KP1 1039 aa14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 RYBPQ8N488 228 aaPredicted RBP14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 PCDH20Q8N6Y1 951 aaKnown RBP14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 TFB1MQ8WVM0 346 aaKnown RBP14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 PTPRN2Q92932 1015 aa14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 ISG20Q96AZ6 181 aaKnown RBP14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 TSGA13Q96PP4 275 aa14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 FAM118BQ9BPY3 351 aa14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 BRD8Q9H0E9 1235 aa14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 SEPT10Q9P0V9 454 aa14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 BCCIPQ9P287 314 aaKnown RBP eCLIP14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 FARP1Q9Y4F1 1045 aaPredicted RBP14.73□□□□□ -0.05
TNFRSF1A-216ENST00000543995 MATN3O15232 486 aa14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 ALDH1A2O94788 518 aa14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 IGSF6O95976 241 aa14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 TCP1P17987 556 aaKnown RBP14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 MMP13P45452 471 aa14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 EIF3EP60228 445 aaKnown RBP14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 SNRPD1P62314 119 aaKnown RBP14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 XRCC4Q13426 336 aa14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 CYTH1Q15438 398 aa14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 CARD16Q5EG05 197 aa14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 C9orf64Q5T6V5 341 aa14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 ANO7Q6IWH7 933 aa14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 MAMSTRQ6ZN01 415 aa14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 PGBD3Q8N328 593 aa14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 OR2T3Q8NH03 318 aa14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 HMGB4Q8WW32 186 aa14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 MAIP1Q8WWC4 291 aa14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 OR8D1Q8WZ84 308 aa14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 EXOC2Q96KP1 924 aa14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 LRFN3Q9BTN0 628 aa14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 SEPT3Q9UH03 358 aa14.72□□□□□ -0.05
TNFRSF1A-216ENST00000543995 HACD1B0YJ81 288 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 KCNK1O00180 336 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 RNASEH1O60930 286 aaKnown RBP14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 PEX11BO96011 259 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 RBP3P10745 1247 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 CCNB1P14635 433 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 RENBPP51606 427 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 ZNF33AQ06730 810 aa14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 HNRNPDQ14103 355 aaKnown RBP14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 ELAVL3Q14576 367 aaKnown RBP14.71□□□□□ -0.05
TNFRSF1A-216ENST00000543995 ATXN7L2Q5T6C5 722 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms