RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ZNF783Q6ZMS7 281 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 SPRED2Q7Z698 418 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 CYP4X1Q8N118 509 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 LEMD2Q8NC56 503 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 OR52K1Q8NGK4 314 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 SLC22A17Q8WUG5 538 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 DCAKDQ8WVC6 231 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 ARNTL2Q8WYA1 636 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 THOC1Q96FV9 657 aaKnown RBP9.49□□□□□ -0.89
GNE-206ENST00000543356 TGS1Q96RS0 853 aaKnown RBP9.49□□□□□ -0.89
GNE-206ENST00000543356 CORO1BQ9BR76 489 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 ATXN3LQ9H3M9 355 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 SYBUQ9NX95 663 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 SENP1Q9P0U3 644 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 TBC1D30Q9Y2I9 924 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 A0A1W2PRU2 124 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 ALDH1A2O94788 518 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 CKMP06732 381 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 MYL4P12829 197 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 HOXD9P28356 352 aaPredicted RBP9.49□□□□□ -0.89
GNE-206ENST00000543356 IRS1P35568 1242 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 ACVRL1P37023 503 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 MDH1P40925 334 aaKnown RBP9.49□□□□□ -0.89
GNE-206ENST00000543356 MSH2P43246 934 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 SESN2P58004 480 aaPredicted RBP9.49□□□□□ -0.89
GNE-206ENST00000543356 RPS24P62847 133 aaKnown RBP9.49□□□□□ -0.89
GNE-206ENST00000543356 IRX1P78414 480 aaPredicted RBP9.49□□□□□ -0.89
GNE-206ENST00000543356 CDH17Q12864 832 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 MPP3Q13368 585 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 TMCO4Q5TGY1 634 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 ARMC3Q5W041 872 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 ZNF449Q6P9G9 518 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 HTR3DQ70Z44 454 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 CCDC117Q8IWD4 279 aaPredicted RBP9.49□□□□□ -0.89
GNE-206ENST00000543356 HJURPQ8NCD3 748 aaPredicted RBP9.49□□□□□ -0.89
GNE-206ENST00000543356 MICAL1Q8TDZ2 1067 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 SLC44A1Q8WWI5 657 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 IMP4Q96G21 291 aaKnown RBP9.49□□□□□ -0.89
GNE-206ENST00000543356 TBL1YQ9BQ87 522 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 ETAA1Q9NY74 926 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 BFARQ9NZS9 450 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 TBK1Q9UHD2 729 aa9.49□□□□□ -0.89
GNE-206ENST00000543356 ATG2AQ2TAZ0 1938 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 MKI67P46013 3256 aaKnown RBP9.48□□□□□ -0.89
GNE-206ENST00000543356 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.48□□□□□ -0.89
GNE-206ENST00000543356 FAM159BA6NKW6 160 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 RHOCP08134 193 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 PTPN2P17706 415 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 ADRA1AP35348 466 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 ETFBP38117 255 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 CCNHP51946 323 aaPredicted RBP9.48□□□□□ -0.89
GNE-206ENST00000543356 ZXDBP98169 803 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 SLC10A7Q0GE19 358 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 ZNF177Q13360 481 aaPredicted RBP9.48□□□□□ -0.89
GNE-206ENST00000543356 NAB1Q13506 487 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 LBRQ14739 615 aaKnown RBP9.48□□□□□ -0.89
GNE-206ENST00000543356 KBTBD12Q3ZCT8 623 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 SPANXN3Q5MJ09 141 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 FBXW10Q5XX13 1052 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 FAM109BQ6ICB4 259 aaPredicted RBP9.48□□□□□ -0.89
GNE-206ENST00000543356 TRABD2AQ86V40 505 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 ZNF354CQ86Y25 554 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 CPXM2Q8N436 756 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 MAB21L3Q8N8X9 362 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 SPATA22Q8NHS9 363 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 TADA1Q96BN2 335 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 PABPC5Q96DU9 382 aaKnown RBP9.48□□□□□ -0.89
GNE-206ENST00000543356 IL22Q9GZX6 179 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 VPS45Q9NRW7 570 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 HAUS2Q9NVX0 235 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 MOCS1Q9NZB8 636 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 SAMD15Q9P1V8 674 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 DPP7Q9UHL4 492 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 ZNF180Q9UJW8 692 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 ARHGAP26Q9UNA1 814 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 MAGEB16A2A368 324 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 TYW5A2RUC4 315 aaKnown RBP9.48□□□□□ -0.89
GNE-206ENST00000543356 GRXCR1A8MXD5 290 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 KDELR3O43731 214 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 USP12O75317 370 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 MAGEA10P43363 369 aaPredicted RBP9.48□□□□□ -0.89
GNE-206ENST00000543356 GNGT1P63211 74 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 GPM6BQ13491 265 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 OLIG2Q13516 323 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 RFTN1Q14699 578 aaPredicted RBP9.48□□□□□ -0.89
GNE-206ENST00000543356 CRYMQ14894 314 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 ALG1LQ6GMV1 187 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 CXorf57Q6NSI4 855 aaKnown RBP9.48□□□□□ -0.89
GNE-206ENST00000543356 CASC4Q6P4E1 433 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 KDELC1Q6UW63 502 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 PRPF39Q86UA1 669 aaKnown RBP9.48□□□□□ -0.89
GNE-206ENST00000543356 DNAAF3Q8N9W5 541 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 SHKBP1Q8TBC3 707 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 MZB1Q8WU39 189 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 TTC17Q96AE7 1141 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 CENPTQ96BT3 561 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 FAM210AQ96ND0 272 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 SELENOSQ9BQE4 189 aa9.48□□□□□ -0.89
GNE-206ENST00000543356 ACE2Q9BYF1 805 aaPredicted RBP9.48□□□□□ -0.89
GNE-206ENST00000543356 NT5MQ9NPB1 228 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms