RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 ETNK2Q9NVF9 386 aa18.74■□□□□ 0.59
COPS7A-216ENST00000543170 DDX56Q9NY93 547 aaKnown RBP18.74■□□□□ 0.59
COPS7A-216ENST00000543170 WSB2Q9NYS7 404 aaPredicted RBP18.74■□□□□ 0.59
COPS7A-216ENST00000543170 INVSQ9Y283 1065 aa18.74■□□□□ 0.59
COPS7A-216ENST00000543170 FCF1Q9Y324 198 aaKnown RBP18.74■□□□□ 0.59
COPS7A-216ENST00000543170 PCDHGA5Q9Y5G8 931 aa18.74■□□□□ 0.59
COPS7A-216ENST00000543170 ALG6Q9Y672 507 aa18.74■□□□□ 0.59
COPS7A-216ENST00000543170 FAM186AA6NE01 2351 aa18.74■□□□□ 0.59
COPS7A-216ENST00000543170 C1QTNF3-AMACRE9PGA6 284 aa18.73■□□□□ 0.59
COPS7A-216ENST00000543170 BUB1O43683 1085 aa18.73■□□□□ 0.59
COPS7A-216ENST00000543170 TMCC1O94876 653 aa18.73■□□□□ 0.59
COPS7A-216ENST00000543170 GSRP00390 522 aa18.73■□□□□ 0.59
COPS7A-216ENST00000543170 KDELR1P24390 212 aa18.73■□□□□ 0.59
COPS7A-216ENST00000543170 RECQLP46063 649 aaPredicted RBP18.73■□□□□ 0.59
COPS7A-216ENST00000543170 PAPOLAP51003 745 aaKnown RBP18.73■□□□□ 0.59
COPS7A-216ENST00000543170 ANKRD20A8PQ5CZ79 823 aa18.73■□□□□ 0.59
COPS7A-216ENST00000543170 LRRC8AQ8IWT6 810 aa18.73■□□□□ 0.59
COPS7A-216ENST00000543170 FRMD1Q8N878 549 aa18.73■□□□□ 0.59
COPS7A-216ENST00000543170 PCED1AQ9H1Q7 454 aa18.73■□□□□ 0.59
COPS7A-216ENST00000543170 KLHL11Q9NVR0 708 aa18.73■□□□□ 0.59
COPS7A-216ENST00000543170 UBA2Q9UBT2 640 aaPredicted RBP18.73■□□□□ 0.59
COPS7A-216ENST00000543170 PPM1HQ9ULR3 514 aa18.73■□□□□ 0.59
COPS7A-216ENST00000543170 FZD4Q9ULV1 537 aa18.73■□□□□ 0.59
COPS7A-216ENST00000543170 ZFHX2Q9C0A1 2572 aaPredicted RBP18.73■□□□□ 0.59
COPS7A-216ENST00000543170 RIF1Q5UIP0 2472 aaKnown RBP18.73■□□□□ 0.59
COPS7A-216ENST00000543170 MID1O15344 667 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 MAP3K13O43283 966 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 LRP3O75074 770 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 PRNPP04156 253 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 SLC8A1P32418 973 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 PSMD8P48556 350 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 RPL6Q02878 288 aaKnown RBP18.72■□□□□ 0.59
COPS7A-216ENST00000543170 IL10RBQ08334 325 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 KIF5AQ12840 1032 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 MMRN1Q13201 1228 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 RFTN1Q14699 578 aaPredicted RBP18.72■□□□□ 0.59
COPS7A-216ENST00000543170 PAFAH1B3Q15102 231 aaKnown RBP18.72■□□□□ 0.59
COPS7A-216ENST00000543170 LPAL2Q16609 132 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 IFI16Q16666 785 aaKnown RBP18.72■□□□□ 0.59
COPS7A-216ENST00000543170 CARD16Q5EG05 197 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 ZFYVE27Q5T4F4 411 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 NCBP2-AS2Q69YL0 99 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 DPY19L3Q6ZPD9 716 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 DAAM2Q86T65 1068 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 LRRC49Q8IUZ0 686 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 TMIEQ8NEW7 156 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 CADM4Q8NFZ8 388 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 OR2AP1Q8NGE2 309 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 PCDH19Q8TAB3 1148 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 RAPGEF5Q92565 580 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 TOE1Q96GM8 510 aaKnown RBP18.72■□□□□ 0.59
COPS7A-216ENST00000543170 DESI2Q9BSY9 194 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 SP110Q9HB58 689 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 SGK2Q9HBY8 427 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 NCDNQ9UBB6 729 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 NCKAP1Q9Y2A7 1128 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 MFHAS1Q9Y4C4 1052 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 ACTL7AQ9Y615 435 aa18.72■□□□□ 0.59
COPS7A-216ENST00000543170 LRRD1A4D1F6 860 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 C3orf70A6NLC5 250 aaPredicted RBP18.71■□□□□ 0.59
COPS7A-216ENST00000543170 DFFAO00273 331 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 SLC7A4O43246 635 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 NRDCO43847 1150 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 NDUFS2O75306 463 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 IL1BP01584 269 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 KRT1P04264 644 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 CTSLP07711 333 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 CHRNA3P32297 505 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 DPP6P42658 865 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 SNRPD1P62314 119 aaKnown RBP18.71■□□□□ 0.59
COPS7A-216ENST00000543170 PIP4K2CQ8TBX8 421 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 FOXJ1Q92949 421 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 LRIG1Q96JA1 1093 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 ZNF599Q96NL3 588 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 RNF157Q96PX1 679 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 TSGA10Q9BZW7 698 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 BTBD1Q9H0C5 482 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 TNKS2Q9H2K2 1166 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 GOLPH3Q9H4A6 298 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 FBXL12Q9NXK8 326 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 IL36AQ9UHA7 158 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 IPO11Q9UI26 975 aaKnown RBP18.71■□□□□ 0.59
COPS7A-216ENST00000543170 HYOU1Q9Y4L1 999 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 ADGRG1Q9Y653 693 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 DUSP10Q9Y6W6 482 aa18.71■□□□□ 0.59
COPS7A-216ENST00000543170 NUMA1Q14980 2115 aa18.7■□□□□ 0.58
COPS7A-216ENST00000543170 A0A1W2PP55 124 aa18.7■□□□□ 0.58
COPS7A-216ENST00000543170 J3KR12 359 aa18.7■□□□□ 0.58
COPS7A-216ENST00000543170 MFSD11O43934 449 aa18.7■□□□□ 0.58
COPS7A-216ENST00000543170 BNIP3LO60238 219 aa18.7■□□□□ 0.58
COPS7A-216ENST00000543170 DRD3P35462 400 aa18.7■□□□□ 0.58
COPS7A-216ENST00000543170 CCNHP51946 323 aaPredicted RBP18.7■□□□□ 0.58
COPS7A-216ENST00000543170 CCZ1BP86790 482 aa18.7■□□□□ 0.58
COPS7A-216ENST00000543170 CCZ1P86791 482 aaPredicted RBP18.7■□□□□ 0.58
COPS7A-216ENST00000543170 KATNAL2Q8IYT4 538 aa18.7■□□□□ 0.58
COPS7A-216ENST00000543170 AADATQ8N5Z0 425 aa18.7■□□□□ 0.58
COPS7A-216ENST00000543170 PQLC3Q8N755 202 aa18.7■□□□□ 0.58
COPS7A-216ENST00000543170 LRRC57Q8N9N7 239 aa18.7■□□□□ 0.58
COPS7A-216ENST00000543170 ZNF419Q96HQ0 510 aaPredicted RBP18.7■□□□□ 0.58
COPS7A-216ENST00000543170 GDAP1L1Q96MZ0 367 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms