RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	hCG_2014768	A0A024R1R8	64 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	MAGEB16	A2A368	324 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	TCAF2	A6NFQ2	919 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	FAM72C	H0Y354	149 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838		H3BSA7	217 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	NFKBIE	O00221	500 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	CAPNS1	P04632	268 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	PCSK6	P29122	969 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	NOS2	P35228	1153 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	HADHA	P40939	763 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	VGLL4	Q14135	290 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	ZNF618	Q5T7W0	954 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	FAM72A	Q5TYM5	149 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	C9orf57	Q5W0N0	161 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	KCTD11	Q693B1	232 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	FAM72D	Q6L9T8	149 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	FAM72B	Q86X60	149 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	SNX27	Q96L92	541 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	MCMBP	Q9BTE3	642 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	SLC2A11	Q9BYW1	496 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	SEMA6A	Q9H2E6	1030 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	PLEKHA5	Q9HAU0	1116 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	UBP1	Q9NZI7	540 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	DERA	Q9Y315	318 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	NFKB1	P19838	968 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	TKT	P29401	623 aa	Known RBP	13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	CD68	P34810	354 aa	Predicted RBP	13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	SLC12A1	Q13621	1099 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	MGAT5B	Q3V5L5	792 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	SYPL2	Q5VXT5	272 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	LRRC8E	Q6NSJ5	796 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	KLC3	Q6P597	504 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	GK5	Q6ZS86	529 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	ZC3HC1	Q86WB0	502 aa	Known RBP	13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	SLC41A1	Q8IVJ1	513 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	STYX	Q8WUJ0	223 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	NPY6R	Q99463	290 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	THEG	Q9P2T0	379 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	STAP1	Q9ULZ2	295 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	GINS2	Q9Y248	185 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838	SHROOM3	Q8TF72	1996 aa		13.12	□□□□□ -0.31
DDX11-223	ENST00000542838		A0A1B0GTW7	788 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	TMEM233	B4DJY2	109 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	XPO1	O14980	1071 aa	Known RBP	13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	DLX3	O60479	287 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	USP2	O75604	605 aa	Predicted RBP	13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	CNMD	O75829	334 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	PTPN1	P18031	435 aa	Known RBP	13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	EN1	Q05925	392 aa	Predicted RBP	13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	KCTD2	Q14681	263 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	ADRM1	Q16186	407 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	DCAF4L1	Q3SXM0	396 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	PCDH20	Q8N6Y1	951 aa	Known RBP	13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	TRPM4	Q8TD43	1214 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	GBA3	Q9H227	469 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	RHOJ	Q9H4E5	214 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	PIGV	Q9NUD9	493 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	XPR1	Q9UBH6	696 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	CNOT11	Q9UKZ1	510 aa	Known RBP	13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	PADI4	Q9UM07	663 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	ERI2	A8K979	691 aa	Known RBP	13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	SLC35E2B	P0CK96	405 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	ZNF26	P17031	533 aa	Predicted RBP	13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	SLC5A2	P31639	672 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	NDUFV1	P49821	464 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	PSME3	P61289	254 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	ZBTB17	Q13105	803 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	MYBPC3	Q14896	1274 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	ZBTB6	Q15916	424 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	FBXO47	Q5MNV8	452 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	BORA	Q6PGQ7	559 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	TRIML2	Q8N7C3	387 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	WNT8B	Q93098	351 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	UNK	Q9C0B0	810 aa	Known RBP	13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	COQ10B	Q9H8M1	238 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	LMCD1	Q9NZU5	365 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	AP4S1	Q9Y587	144 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	CEPT1	Q9Y6K0	416 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	NUP205	Q92621	2012 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	C7orf72	A4D263	438 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	KCNU1	A8MYU2	1149 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	PFDN1	O60925	122 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	TRMU	O75648	421 aa	Known RBP	13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	SLC25A27	O95847	323 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	ZNF286B	P0CG31	522 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	CYP2C9	P11712	490 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	CDK4	P11802	303 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	CSRP3	P50461	194 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	TPI1	P60174	286 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	CREB5	Q02930	508 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	PPID	Q08752	370 aa	Known RBP	13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	DALRD3	Q5D0E6	543 aa	Known RBP	13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	CENPL	Q8N0S6	344 aa	Predicted RBP	13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	SPATA6L	Q8N4H0	392 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	KDM1B	Q8NB78	822 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	TSPAN14	Q8NG11	270 aa		13.11	□□□□□ -0.31
DDX11-223	ENST00000542838	STON2	Q8WXE9	905 aa		13.11	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms