RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 STT3BQ8TCJ2 826 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 UBXN10Q96LJ8 280 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 NTPCRQ9BSD7 190 aaKnown RBP3.89□□□□□ -1.79
LEMD3-204ENST00000542032 DDX23Q9BUQ8 820 aaKnown RBP3.89□□□□□ -1.79
LEMD3-204ENST00000542032 SF3B5Q9BWJ5 86 aaKnown RBP3.89□□□□□ -1.79
LEMD3-204ENST00000542032 HDHD5Q9BXW7 423 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 KRCC1Q9NPI7 259 aaPredicted RBP3.89□□□□□ -1.79
LEMD3-204ENST00000542032 TMEM248Q9NWD8 314 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 PDP2Q9P2J9 529 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 GJD2Q9UKL4 321 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 RCE1Q9Y256 329 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 RRN3P2A6NIE6 340 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 FAM90A20PA6NIJ5 464 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 NPIPB13A6NJU9 1138 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 NPIPB5A8MRT5 1133 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 BECN2A8MW95 431 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 NPIPB4C9JG80 1138 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 INAFM1C9JVW0 142 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 RGS14O43566 566 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 SPRY3O43610 288 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 HOXC6P09630 235 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 DHRS4L1P0CG22 281 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 CAPN3P20807 821 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 MLH1P40692 756 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 RFX5P48382 616 aaPredicted RBP3.88□□□□□ -1.79
LEMD3-204ENST00000542032 AP2B1P63010 937 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 MPP1Q00013 466 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 EGR4Q05215 589 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 LTBQ06643 244 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 CDK18Q07002 472 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 TAF5Q15542 800 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 ZNF585BQ52M93 769 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 GPATCH4Q5T3I0 446 aaKnown RBP3.88□□□□□ -1.79
LEMD3-204ENST00000542032 GET4Q7L5D6 327 aaPredicted RBP3.88□□□□□ -1.79
LEMD3-204ENST00000542032 FAM185AQ8N0U4 392 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 NAXEQ8NCW5 288 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 PHF21BQ96EK2 531 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 FAM84BQ96KN1 310 aaPredicted RBP3.88□□□□□ -1.79
LEMD3-204ENST00000542032 MEIS3Q99687 375 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 B3GNT4Q9C0J1 378 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 KLHL31Q9H511 634 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 PDE11AQ9HCR9 933 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 CD93Q9NPY3 652 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 SMC4Q9NTJ3 1288 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 ZDHHC7Q9NXF8 308 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 ARL15Q9NXU5 204 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 IFT80Q9P2H3 777 aaPredicted RBP3.88□□□□□ -1.79
LEMD3-204ENST00000542032 WNT16Q9UBV4 365 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 CRYL1Q9Y2S2 319 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 RAI2Q9Y5P3 530 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 INSL5Q9Y5Q6 135 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 SLC4A4Q9Y6R1 1079 aa3.88□□□□□ -1.79
LEMD3-204ENST00000542032 TCRBV7S3A2A0A539 114 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 GRM8O00222 908 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 ACKR2O00590 384 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 HLA-DQA2P01906 255 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 CSTBP04080 98 aaKnown RBP3.87□□□□□ -1.79
LEMD3-204ENST00000542032 PKMP14618 531 aaKnown RBP3.87□□□□□ -1.79
LEMD3-204ENST00000542032 CHRNB2P17787 502 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 PCP4P48539 62 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 ABATP80404 500 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 FOXO1Q12778 655 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 GPS2Q13227 327 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 BLMHQ13867 455 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 POSTNQ15063 836 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 CCDC96Q2M329 555 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 INTS11Q5TA45 600 aaKnown RBP3.87□□□□□ -1.79
LEMD3-204ENST00000542032 ATG9BQ674R7 924 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 DGAT2L7PQ6IED9 249 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 RETSATQ6NUM9 610 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 JMJD6Q6NYC1 403 aaPredicted RBP3.87□□□□□ -1.79
LEMD3-204ENST00000542032 C18orf65Q6ZTR6 163 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 RSRC2Q7L4I2 434 aaKnown RBP3.87□□□□□ -1.79
LEMD3-204ENST00000542032 IGFN1Q86VF2 1251 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 CCDC25Q86WR0 208 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 SPATA2LQ8IUW3 424 aaPredicted RBP3.87□□□□□ -1.79
LEMD3-204ENST00000542032 FAM217AQ8IXS0 508 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 CACNA2D3Q8IZS8 1091 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 TTC30BQ8N4P2 665 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 ELP5Q8TE02 316 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 OTUD7AQ8TE49 926 aaPredicted RBP3.87□□□□□ -1.79
LEMD3-204ENST00000542032 HDAC7Q8WUI4 952 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 SNRNP27Q8WVK2 155 aaKnown RBP3.87□□□□□ -1.79
LEMD3-204ENST00000542032 ZNF419Q96HQ0 510 aaPredicted RBP3.87□□□□□ -1.79
LEMD3-204ENST00000542032 FRG2BQ96QU4 278 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 SERINC2Q96SA4 455 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 RMDN3Q96TC7 470 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 DCLK3Q9C098 648 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 SLCO5A1Q9H2Y9 848 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 HIPK3Q9H422 1215 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 BLOC1S4Q9NUP1 217 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 HIF1ANQ9NWT6 349 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 MST1RQ04912 1400 aa3.87□□□□□ -1.79
LEMD3-204ENST00000542032 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.86□□□□□ -1.79
LEMD3-204ENST00000542032 I6L893 689 aaPredicted RBP3.86□□□□□ -1.79
LEMD3-204ENST00000542032 EIF3FO00303 357 aaPredicted RBP3.86□□□□□ -1.79
LEMD3-204ENST00000542032 FIBPO43427 364 aa3.86□□□□□ -1.79
LEMD3-204ENST00000542032 MBD4O95243 580 aa3.86□□□□□ -1.79
LEMD3-204ENST00000542032 IFIT1P09914 478 aaKnown RBP3.86□□□□□ -1.79
LEMD3-204ENST00000542032 CKMT1AP12532 417 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms