RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 POLNQ7Z5Q5 900 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 AMIGO1Q86WK6 493 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 FSTL5Q8N475 847 aaPredicted RBP15.54■□□□□ 0.08
HMGA2-210ENST00000541363 OR10H5Q8NGA6 315 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 APOPT1Q96IL0 206 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 FAAH2Q6GMR7 532 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 TESCQ96BS2 214 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 SLC39A8Q9C0K1 460 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 CHMP1AQ9HD42 196 aaPredicted RBP15.54■□□□□ 0.08
HMGA2-210ENST00000541363 LAMC1P11047 1609 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 DGKAP23743 735 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 GSTT1P30711 240 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 NAB1Q13506 487 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.54■□□□□ 0.08
HMGA2-210ENST00000541363 SYNMO15061 1565 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 CASKO14936 926 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 CYP2B6P20813 491 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 MED22Q15528 200 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 MXRA8Q9BRK3 442 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 THRBP10828 461 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 KLRC1P26715 233 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 FXR1P51114 621 aaKnown RBP eCLIP15.54■□□□□ 0.08
HMGA2-210ENST00000541363 LSM3P62310 102 aaKnown RBP15.54■□□□□ 0.08
HMGA2-210ENST00000541363 FMR1Q06787 632 aaKnown RBP eCLIP15.54■□□□□ 0.08
HMGA2-210ENST00000541363 ZNF607Q96SK3 696 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 MTG1Q9BT17 334 aaPredicted RBP15.54■□□□□ 0.08
HMGA2-210ENST00000541363 ZNF780BQ9Y6R6 833 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 WDR27A2RRH5 827 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 CCZ1BP86790 482 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 CCZ1P86791 482 aaPredicted RBP15.54■□□□□ 0.08
HMGA2-210ENST00000541363 LLGL2Q6P1M3 1020 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 PTCHD4Q6ZW05 846 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 SRBD1Q8N5C6 995 aaKnown RBP15.54■□□□□ 0.08
HMGA2-210ENST00000541363 SYTL5Q8TDW5 730 aaPredicted RBP15.54■□□□□ 0.08
HMGA2-210ENST00000541363 SAR1AQ9NR31 198 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 ATL1Q8WXF7 558 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 BSNDQ8WZ55 320 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 RNF31Q96EP0 1072 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 PPP1R16AQ96I34 528 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 GLT1D1Q96MS3 346 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 NUDT12Q9BQG2 462 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 MTMR12Q9C0I1 747 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 IFT46Q9NQC8 304 aa15.54■□□□□ 0.08
HMGA2-210ENST00000541363 RAMP2O60895 175 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 ATF4P18848 351 aaPredicted RBP15.53■□□□□ 0.08
HMGA2-210ENST00000541363 GP5P40197 560 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 SETD6Q8TBK2 473 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 DPF2Q92785 391 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 DAGLAQ9Y4D2 1042 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 GNB5O14775 395 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 SDC2P34741 201 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 ATXN1P54253 815 aaKnown RBP15.53■□□□□ 0.08
HMGA2-210ENST00000541363 MRPS22P82650 360 aaKnown RBP15.53■□□□□ 0.08
HMGA2-210ENST00000541363 PSMD5Q16401 504 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 CRY1Q16526 586 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 CGRRF1Q99675 332 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.53■□□□□ 0.08
HMGA2-210ENST00000541363 DDX20Q9UHI6 824 aaKnown RBP15.53■□□□□ 0.08
HMGA2-210ENST00000541363 AVILO75366 819 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 SH3BGRLO75368 114 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 SGPL1O95470 568 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 THP07101 528 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 SMIM5Q71RC9 77 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 SNX32Q86XE0 403 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 TRAPPC5Q8IUR0 188 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 FAR1Q8WVX9 515 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 ANKRD7Q92527 254 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 SNX7Q9UNH6 387 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 FMO4P31512 558 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 BMT2Q1RMZ1 405 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 GJB7Q6PEY0 223 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 LRRC69Q6ZNQ3 347 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 JAZF1Q86VZ6 243 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 GPRC5AQ8NFJ5 357 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 RAD51AP1Q96B01 352 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 PLCL2Q9UPR0 1127 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 FAM172BPA6NC97 362 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 CHST10O43529 356 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 OR10H3O60404 316 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 CSH1P0DML2 217 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 CSH2P0DML3 217 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 HOXC12P31275 282 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 INSCQ1MX18 579 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 AIF1LQ9BQI0 150 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 SPATA9Q9BWV2 254 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 MRTO4Q9UKD2 239 aaKnown RBP15.53■□□□□ 0.08
HMGA2-210ENST00000541363 RRM1P23921 792 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 IST1P53990 364 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 BCL2L1Q07817 233 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 ABRQ12979 859 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 SPOCD1Q6ZMY3 1216 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 SGCDQ92629 289 aa15.53■□□□□ 0.08
HMGA2-210ENST00000541363 POP5Q969H6 163 aaKnown RBP15.53■□□□□ 0.08
HMGA2-210ENST00000541363 EFHD2Q96C19 240 aaPredicted RBP15.53■□□□□ 0.08
HMGA2-210ENST00000541363 CCNB2O95067 398 aa15.52■□□□□ 0.08
HMGA2-210ENST00000541363 LSM8O95777 96 aaKnown RBP15.52■□□□□ 0.08
HMGA2-210ENST00000541363 THOP1P52888 689 aa15.52■□□□□ 0.08
HMGA2-210ENST00000541363 OLR1P78380 273 aa15.52■□□□□ 0.08
HMGA2-210ENST00000541363 SLC45A4Q5BKX6 768 aa15.52■□□□□ 0.08
HMGA2-210ENST00000541363 FNBP1LQ5T0N5 605 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms