RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 EEF2KO00418 725 aaKnown RBP10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 PFDN1O60925 122 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 ZBTB7AO95365 584 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 PGK1P00558 417 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 JCHAINP01591 159 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 GNAO1P09471 354 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 TFPTP0C1Z6 253 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 THRAP10827 490 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 GNL1P36915 607 aaPredicted RBP10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 MAPK10P53779 464 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 SOX4Q06945 474 aaPredicted RBP10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 LAMC2Q13753 1193 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 TSTD2Q5T7W7 516 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 GRTP1Q5TC63 336 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 DUS1LQ6P1R4 473 aaKnown RBP10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 CNSTQ6PJW8 725 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 B3GNT6Q6ZMB0 384 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 CLEC14AQ86T13 490 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 PDCD6IPQ8WUM4 868 aaKnown RBP10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 APBB2Q92870 758 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 STN1Q9H668 368 aaKnown RBP10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 ELP3Q9H9T3 547 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 FBRSL1Q9HCM7 1045 aaKnown RBP10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 PTGDR2Q9Y5Y4 395 aa10.53□□□□□ -0.72
CDC42SE1-207ENST00000540998 SEC24DO94855 1032 aaPredicted RBP10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 LGALS2P05162 132 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 SLC35E2BP0CK96 405 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 PPARGP37231 505 aaPredicted RBP10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 PTPN9P43378 593 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 HPCAP84074 193 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 POU5F1BQ06416 359 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 PTK2BQ14289 1009 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 MGAT5BQ3V5L5 792 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 CCDC153Q494R4 210 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 GPRIN1Q7Z2K8 1008 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 TMEM102Q8N9M5 508 aaPredicted RBP10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 SH3RF2Q8TEC5 729 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 BTBD9Q96Q07 612 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 DCUN1D5Q9BTE7 237 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 TRPV6Q9H1D0 765 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 VRTNQ9H8Y1 702 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 TRPC7Q9HCX4 862 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 TMEM30AQ9NV96 361 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 TTC3P53804 2025 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 SMIM31A0A1B0GVY4 71 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 DENRO43583 198 aaKnown RBP10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 HBP1O60381 514 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 TIPRLO75663 272 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 AHSGP02765 367 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 FAM58BPP0C7Q3 252 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 CHRNA4P43681 627 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 NSUN2Q08J23 767 aaKnown RBP eCLIP10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 BST2Q10589 180 aaKnown RBP10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 ZNF789Q5FWF6 425 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 STXBP5Q5T5C0 1151 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 TICAM1Q8IUC6 712 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 RIOX2Q8IUF8 465 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 TXNDC5Q8NBS9 432 aaKnown RBP10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 OSMRQ99650 979 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 SIKE1Q9BRV8 207 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 C1QTNF1Q9BXJ1 281 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 OSBPL2Q9H1P3 480 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 SMARCAD1Q9H4L7 1026 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 NOL11Q9H8H0 719 aaKnown RBP10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 LRRC40Q9H9A6 602 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 BFARQ9NZS9 450 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 C6orf203Q9P0P8 240 aaPredicted RBP10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 EPS15L1Q9UBC2 864 aa10.52□□□□□ -0.73
CDC42SE1-207ENST00000540998 A0A0J9YVX5 310 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 PDLIM1O00151 329 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 ACOT8O14734 319 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 CNMDO75829 334 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 PIM1P11309 404 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 MLNP12872 115 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 ZFXP17010 805 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 ME2P23368 584 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 YWHAQP27348 245 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 RGS2P41220 211 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 NDST2P52849 883 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 MAP3K7CLP57077 242 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 PDAP1Q13442 181 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 FBXO48Q5FWF7 155 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 PLPPR4Q7Z2D5 763 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 DEFB132Q7Z7B7 95 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 LDB1Q86U70 411 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 OSTM1Q86WC4 334 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 NUP93Q8N1F7 819 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 PHF21BQ96EK2 531 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 CHST12Q9NRB3 414 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 PTTG2Q9NZH5 202 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 CDYLQ9Y232 598 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 PRSS51A0A1B0GVH4 220 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 PRORSD1PA6NEY8 169 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 SAC3D1A6NKF1 404 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 ZNF839A8K0R7 811 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 USP2O75604 605 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 RECQL4O94761 1208 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 MT-ND1P03886 318 aa10.51□□□□□ -0.73
CDC42SE1-207ENST00000540998 MATKP42679 507 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms