RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	RTL3	Q8N8U3	475 aa	Known RBP	13.92	□□□□□ -0.18
POLE-215	ENST00000540987	GRIN3A	Q8TCU5	1115 aa		13.92	□□□□□ -0.18
POLE-215	ENST00000540987	VOPP1	Q96AW1	172 aa		13.92	□□□□□ -0.18
POLE-215	ENST00000540987	CAMK1G	Q96NX5	476 aa		13.92	□□□□□ -0.18
POLE-215	ENST00000540987	CEP44	Q9C0F1	390 aa		13.92	□□□□□ -0.18
POLE-215	ENST00000540987	KLC2	Q9H0B6	622 aa		13.92	□□□□□ -0.18
POLE-215	ENST00000540987	GAREM1	Q9H706	876 aa		13.92	□□□□□ -0.18
POLE-215	ENST00000540987	PARVA	Q9NVD7	372 aa		13.92	□□□□□ -0.18
POLE-215	ENST00000540987	IFNK	Q9P0W0	207 aa		13.92	□□□□□ -0.18
POLE-215	ENST00000540987	CNOT8	Q9UFF9	292 aa	Known RBP	13.92	□□□□□ -0.18
POLE-215	ENST00000540987	ANKRD6	Q9Y2G4	727 aa		13.92	□□□□□ -0.18
POLE-215	ENST00000540987	CHD8	Q9HCK8	2581 aa		13.92	□□□□□ -0.18
POLE-215	ENST00000540987	ACACB	O00763	2458 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	KNL1	Q8NG31	2342 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	CEP295	Q9C0D2	2601 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987		A0A1W2PR77	199 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	TMEM191C	A6NGB0	347 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	GOLGA6L19	H0YKK7	550 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	KPNA3	O00505	521 aa	Predicted RBP	13.91	□□□□□ -0.18
POLE-215	ENST00000540987	CREB3	O43889	395 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	SH3BP5	O60239	455 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	RAMP2	O60895	175 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	CER1	O95813	267 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	GYPC	P04921	128 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	EPHB2	P29323	1055 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	CTSK	P43235	329 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	RACK1	P63244	317 aa	Known RBP	13.91	□□□□□ -0.18
POLE-215	ENST00000540987	TEAD4	Q15561	434 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	TDRD12	Q587J7	1177 aa	Known RBP	13.91	□□□□□ -0.18
POLE-215	ENST00000540987	LEKR1	Q6ZMV7	388 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	NAXD	Q8IW45	347 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	PCDH20	Q8N6Y1	951 aa	Known RBP	13.91	□□□□□ -0.18
POLE-215	ENST00000540987	CCDC114	Q96M63	670 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	EPAS1	Q99814	870 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	SNRNP25	Q9BV90	132 aa	Known RBP	13.91	□□□□□ -0.18
POLE-215	ENST00000540987	TM6SF2	Q9BZW4	377 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	MAGEH1	Q9H213	219 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	RETREG1	Q9H6L5	497 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	AP4E1	Q9UPM8	1137 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	WASF3	Q9UPY6	502 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	DOCK9	Q9BZ29	2069 aa		13.91	□□□□□ -0.18
POLE-215	ENST00000540987	TPR	P12270	2363 aa	Known RBP	13.9	□□□□□ -0.18
POLE-215	ENST00000540987	PCNX2	A6NKB5	2137 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	TBC1D3D	A0A087WVF3	549 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	TBC1D3I	A0A087WXS9	549 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	TBC1D3E	A0A087X179	549 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	TBC1D3K	A0A087X1G2	549 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.9	□□□□□ -0.18
POLE-215	ENST00000540987	WASH4P	A8MWX3	477 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	TBC1D3L	B9A6J9	549 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987		H0Y8X5	98 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	KCNK3	O14649	394 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	LEFTY1	O75610	366 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	TOP3B	O95985	862 aa	Known RBP	13.9	□□□□□ -0.18
POLE-215	ENST00000540987	PRNP	P04156	253 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	TBC1D3H	P0C7X1	549 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	ZNF883	P0CG24	379 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	MAT2A	P31153	395 aa	Known RBP	13.9	□□□□□ -0.18
POLE-215	ENST00000540987	ETFB	P38117	255 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	CCNH	P51946	323 aa	Predicted RBP	13.9	□□□□□ -0.18
POLE-215	ENST00000540987	AIF1	P55008	147 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	ZBED6	P86452	979 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	SLC14A1	Q13336	389 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	ARSI	Q5FYB1	569 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	TBC1D3G	Q6DHY5	549 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	TBC1D3C	Q6IPX1	549 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	IL27RA	Q6UWB1	636 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	TRIM69	Q86WT6	500 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.9	□□□□□ -0.18
POLE-215	ENST00000540987	TMIE	Q8NEW7	156 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	OR6K2	Q8NGY2	324 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	SYN2	Q92777	582 aa	Predicted RBP	13.9	□□□□□ -0.18
POLE-215	ENST00000540987	HMCES	Q96FZ2	354 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	CNTNAP3B	Q96NU0	1288 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	KCTD15	Q96SI1	283 aa	Predicted RBP	13.9	□□□□□ -0.18
POLE-215	ENST00000540987	CNTNAP3	Q9BZ76	1288 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	XPO4	Q9C0E2	1151 aa	Known RBP	13.9	□□□□□ -0.18
POLE-215	ENST00000540987	ISCU	Q9H1K1	167 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	SLC32A1	Q9H598	525 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	TM7SF3	Q9NS93	570 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	ARHGAP20	Q9P2F6	1191 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	MYO1A	Q9UBC5	1043 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	IL36A	Q9UHA7	158 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	CAPN11	Q9UMQ6	739 aa		13.9	□□□□□ -0.18
POLE-215	ENST00000540987	CXorf51A	A0A1B0GTR3	108 aa		13.89	□□□□□ -0.19
POLE-215	ENST00000540987	RASA4B	C9J798	803 aa		13.89	□□□□□ -0.19
POLE-215	ENST00000540987	VILL	O15195	856 aa		13.89	□□□□□ -0.19
POLE-215	ENST00000540987	RASA4	O43374	803 aa		13.89	□□□□□ -0.19
POLE-215	ENST00000540987	CBFA2T3	O75081	653 aa		13.89	□□□□□ -0.19
POLE-215	ENST00000540987	LRCH4	O75427	683 aa		13.89	□□□□□ -0.19
POLE-215	ENST00000540987	MIP	P30301	263 aa		13.89	□□□□□ -0.19
POLE-215	ENST00000540987	GK	P32189	559 aa		13.89	□□□□□ -0.19
POLE-215	ENST00000540987	RECQL	P46063	649 aa	Predicted RBP	13.89	□□□□□ -0.19
POLE-215	ENST00000540987	DNA2	P51530	1060 aa		13.89	□□□□□ -0.19
POLE-215	ENST00000540987	TPI1	P60174	286 aa		13.89	□□□□□ -0.19
POLE-215	ENST00000540987	SIM1	P81133	766 aa	Predicted RBP	13.89	□□□□□ -0.19
POLE-215	ENST00000540987	SHC2	P98077	582 aa		13.89	□□□□□ -0.19
POLE-215	ENST00000540987	SLC20A2	Q08357	652 aa		13.89	□□□□□ -0.19
POLE-215	ENST00000540987	FOXC1	Q12948	553 aa		13.89	□□□□□ -0.19
POLE-215	ENST00000540987	POLD3	Q15054	466 aa	Predicted RBP	13.89	□□□□□ -0.19

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