RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 NPWQ8N729 165 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 PIP4K2CQ8TBX8 421 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 GANCQ8TET4 914 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 PCED1AQ9H1Q7 454 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 ZWILCHQ9H900 591 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 DLL3Q9NYJ7 618 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 FZD4Q9ULV1 537 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 NCKAP1Q9Y2A7 1128 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 SLCO1B1Q9Y6L6 691 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 DCHS1Q96JQ0 3298 aa17.23■□□□□ 0.35
CD9-209ENST00000540891 MEI4A8MW99 385 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 KHNYNO15037 678 aaKnown RBP17.22■□□□□ 0.35
CD9-209ENST00000540891 PROSCO94903 275 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 CHRNA3P32297 505 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 HCAR3P49019 387 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 NDST2P52849 883 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 SERINC3Q13530 473 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 POM121L1PQ3SYA9 428 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 PARP15Q460N3 678 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 AFMIDQ63HM1 303 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 POLNQ7Z5Q5 900 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 DSG4Q86SJ6 1040 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 ARHGAP12Q8IWW6 846 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 RGL4Q8IZJ4 473 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 PCDH20Q8N6Y1 951 aaKnown RBP17.22■□□□□ 0.35
CD9-209ENST00000540891 NETO2Q8NC67 525 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 C1orf216Q8TAB5 229 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 TEKT4Q8WW24 435 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 HSPH1Q92598 858 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 CELF6Q96J87 481 aaKnown RBP17.22■□□□□ 0.35
CD9-209ENST00000540891 OMDQ99983 421 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 PDFQ9HBH1 243 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 FSCN3Q9NQT6 498 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.22■□□□□ 0.35
CD9-209ENST00000540891 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.22■□□□□ 0.35
CD9-209ENST00000540891 WASF2Q9Y6W5 498 aa17.22■□□□□ 0.35
CD9-209ENST00000540891 GON4LQ3T8J9 2241 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 C1QTNF3-AMACRE9PGA6 284 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 IGHV4-34P06331 123 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 ARSEP51690 589 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 ZNF135P52742 658 aaPredicted RBP17.21■□□□□ 0.35
CD9-209ENST00000540891 ADPRHP54922 357 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 TAS2R40P59535 323 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 SFSWAPQ12872 951 aaKnown RBP17.21■□□□□ 0.35
CD9-209ENST00000540891 DUOXA1Q1HG43 343 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 CARD16Q5EG05 197 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 WDR45BQ5MNZ6 344 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 SYCP2LQ5T4T6 812 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 FAM46CQ5VWP2 391 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 NCEH1Q6PIU2 408 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.21■□□□□ 0.35
CD9-209ENST00000540891 TP53INP2Q8IXH6 220 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 TMIEQ8NEW7 156 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 SLC35G2Q8TBE7 412 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 NETO1Q8TDF5 533 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 TSC1Q92574 1164 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 ISG20Q96AZ6 181 aaKnown RBP17.21■□□□□ 0.35
CD9-209ENST00000540891 ARRDC3Q96B67 414 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 BIRC7Q96CA5 298 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 CCDC114Q96M63 670 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 ORAI3Q9BRQ5 295 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 EDEM2Q9BV94 578 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 TM6SF2Q9BZW4 377 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 SLC39A8Q9C0K1 460 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 CAPN10Q9HC96 672 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 PCDH18Q9HCL0 1135 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 EIF2B4Q9UI10 523 aaKnown RBP17.21■□□□□ 0.35
CD9-209ENST00000540891 HPCAL4Q9UM19 191 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 MFHAS1Q9Y4C4 1052 aa17.21■□□□□ 0.35
CD9-209ENST00000540891 ZSCAN5CA6NGD5 496 aaPredicted RBP17.2■□□□□ 0.34
CD9-209ENST00000540891 H3BRJ5 948 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 DAPK3O43293 454 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 BUB1O43683 1085 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 MTA2O94776 668 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 TMCC1O94876 653 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 LCA5LO95447 670 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 SERPINF2P08697 491 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 FECHP22830 423 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 IL4RP24394 825 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 ID4P47928 161 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 PAPOLAP51003 745 aaKnown RBP17.2■□□□□ 0.34
CD9-209ENST00000540891 CCNHP51946 323 aaPredicted RBP17.2■□□□□ 0.34
CD9-209ENST00000540891 LIMK1P53667 647 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 GEMIN4P57678 1058 aaKnown RBP17.2■□□□□ 0.34
CD9-209ENST00000540891 CNTN1Q12860 1018 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 ATP13A4Q4VNC1 1196 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 ARSIQ5FYB1 569 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 AGBL4Q5VU57 503 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 KIAA0895LQ68EN5 471 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 ZNF354CQ86Y25 554 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 PLPP6Q8IY26 295 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 CEP76Q8TAP6 659 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 FAM71BQ8TC56 605 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 CSPG4P5Q96PW8 444 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 ETNK2Q9NVF9 386 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 DONSONQ9NYP3 566 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 IL36AQ9UHA7 158 aa17.2■□□□□ 0.34
CD9-209ENST00000540891 CDV3Q9UKY7 258 aaKnown RBP17.2■□□□□ 0.34
CD9-209ENST00000540891 FARP1Q9Y4F1 1045 aaPredicted RBP17.2■□□□□ 0.34
CD9-209ENST00000540891 CEP250Q9BV73 2442 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms