RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 FNDC5Q8NAU1 212 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 CPXM1Q96SM3 734 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 POMKQ9H5K3 350 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 ITGAVP06756 1048 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 PIRTP0C851 137 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 LILRA4P59901 499 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 ARHGAP1Q07960 439 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 VARS2Q5ST30 1063 aaKnown RBP14.29□□□□□ -0.12
USP3-204ENST00000540797 LRRN4Q8WUT4 740 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 HGH1Q9BTY7 390 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 KRCC1Q9NPI7 259 aaPredicted RBP14.29□□□□□ -0.12
USP3-204ENST00000540797 FBXO6Q9NRD1 293 aaPredicted RBP14.29□□□□□ -0.12
USP3-204ENST00000540797 KPNA5O15131 536 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 ADRA1BP35368 520 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 CDK18Q07002 472 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 FAM124AQ86V42 546 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 NKAPQ8N5F7 415 aaKnown RBP14.29□□□□□ -0.12
USP3-204ENST00000540797 TCF7L2Q9NQB0 619 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 XPNPEP1Q9NQW7 623 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 NFATC1O95644 943 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 FAM153BP0C7A2 387 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 PEX5P50542 639 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 CHRNB3Q05901 458 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 FPGSQ05932 587 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 FAM153CQ494X1 144 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 PAGE2BQ5JRK9 111 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 GRAMD4Q6IC98 578 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 BNC2Q6ZN30 1099 aaPredicted RBP14.29□□□□□ -0.12
USP3-204ENST00000540797 P3H2Q8IVL5 708 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 FAM120BQ96EK7 910 aaKnown RBP14.29□□□□□ -0.12
USP3-204ENST00000540797 GDF3Q9NR23 364 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 VTI1BQ9UEU0 232 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 TMEM191CA6NGB0 347 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 ANXA5P08758 320 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 PLOD1Q02809 727 aaPredicted RBP14.29□□□□□ -0.12
USP3-204ENST00000540797 GALNT3Q14435 633 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 HLA-DQA1Q5Y7H0 255 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 PCDH18Q9HCL0 1135 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 MORF4L1Q9UBU8 362 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 TMCC3Q9ULS5 477 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 PCDHB9Q9Y5E1 797 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 PCDHA11Q9Y5I1 949 aa14.29□□□□□ -0.12
USP3-204ENST00000540797 A0A088AWK7 358 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 ABCB1P08183 1280 aaPredicted RBP14.28□□□□□ -0.12
USP3-204ENST00000540797 ZNF10P21506 573 aaPredicted RBP14.28□□□□□ -0.12
USP3-204ENST00000540797 CDK7P50613 346 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 UNC5AQ6ZN44 842 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 XYLT1Q86Y38 959 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 NDRG1Q92597 394 aaKnown RBP14.28□□□□□ -0.12
USP3-204ENST00000540797 KLHL5Q96PQ7 755 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 GTF2IRD1Q9UHL9 959 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 TNPO3Q9Y5L0 923 aaKnown RBP14.28□□□□□ -0.12
USP3-204ENST00000540797 CLTBP09497 229 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 CCL5P13501 91 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 LPOP22079 712 aaPredicted RBP14.28□□□□□ -0.12
USP3-204ENST00000540797 MMP8P22894 467 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 PPP2R1BP30154 601 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 SLC16A1P53985 500 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 DAB2P98082 770 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 TJAP1Q5JTD0 557 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 LYPLAL1Q5VWZ2 237 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 OLFML2BQ68BL8 750 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 FAM45BPQ6NSW5 357 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 FAM45AQ8TCE6 357 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 IRGQQ8WZA9 623 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 TADA1Q96BN2 335 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 CATSPER2Q96P56 530 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 PCDHB18PQ96TA0 734 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 MYOCQ99972 504 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 STXBP5LQ9Y2K9 1186 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 KCPQ6ZWJ8 1503 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 EIF4E1BA6NMX2 242 aaKnown RBP14.28□□□□□ -0.12
USP3-204ENST00000540797 QSOX1O00391 747 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 NDUFB5O43674 189 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 RRM2P31350 389 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 RASA2Q15283 850 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 ZNF618Q5T7W0 954 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 CYP4Z1Q86W10 505 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 NETO2Q8NC67 525 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 STAG3L4Q8TBR4 150 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 CERS2Q96G23 380 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 C11orf84Q9BUA3 381 aaPredicted RBP14.28□□□□□ -0.12
USP3-204ENST00000540797 PTPRHQ9HD43 1115 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 TXNRD2Q9NNW7 524 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 Q9Y3F1 56 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 CLUHO75153 1309 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 ANKDD1BA6NHY2 528 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 SH3BGRLO75368 114 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 PTPN2P17706 415 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 ADRA1DP25100 572 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 PSRC1Q6PGN9 363 aaPredicted RBP14.28□□□□□ -0.12
USP3-204ENST00000540797 CEP68Q76N32 757 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 CEP70Q8NHQ1 597 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 NPLOC4Q8TAT6 608 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 BBS4Q96RK4 519 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 THAP1Q9NVV9 213 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 SOHLH2Q9NX45 425 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 MEI4A8MW99 385 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 CYP7B1O75881 506 aa14.28□□□□□ -0.12
USP3-204ENST00000540797 ZNF682O95780 498 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms