RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 RNF148Q8N7C7 305 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 LILRB1Q8NHL6 650 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 SLC44A1Q8WWI5 657 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 MAP6Q96JE9 813 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 PSKH2Q96QS6 385 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 AIFM2Q9BRQ8 373 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 OR2B2Q9GZK3 357 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 IKZF4Q9H2S9 585 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 ATP13A3Q9H7F0 1226 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 VRTNQ9H8Y1 702 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 PLEKHA5Q9HAU0 1116 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 ZNF304Q9HCX3 659 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 UBE2TQ9NPD8 197 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 AKIP1Q9NQ31 210 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 HMGXB4Q9UGU5 601 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 KAT6AQ92794 2004 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 POTEB3A0JP26 581 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 TRIM49D1C9J1S8 452 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 ENPP3O14638 875 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 DYRK3O43781 588 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 SEC24DO94855 1032 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 BPGMP07738 259 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 SSTR3P32745 418 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 PSMC2P35998 433 aaKnown RBP9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 RACK1P63244 317 aaKnown RBP9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 BASP1P80723 227 aaKnown RBP9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 MYL7Q01449 175 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 OCA2Q04671 838 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 GALNT1Q10472 559 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 CEACAM7Q14002 265 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 GRB14Q14449 540 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 ZNF792Q3KQV3 632 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 HYIQ5T013 277 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 POTEBQ6S5H4 581 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 HERC6Q8IVU3 1022 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 ABRAQ8N0Z2 381 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 UBR7Q8N806 425 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 DTX3Q8N9I9 347 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 LRTOMTQ8WZ04 291 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 FIG4Q92562 907 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 TFAP2CQ92754 450 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 ATP6V1E2Q96A05 226 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 IL12RB2Q99665 862 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 MTG1Q9BT17 334 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 RUSC1Q9BVN2 902 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 SLC13A1Q9BZW2 595 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 RAD21L1Q9H4I0 556 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 ZNF229Q9UJW7 825 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 PSME2Q9UL46 239 aa9.62□□□□□ -0.87
CTNNA1-243ENST00000540387 BCAS2O75934 225 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 SLITRK3O94933 977 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 ALDH1A1P00352 501 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 CTGFP29279 349 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 PRKAA2P54646 552 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 SP2Q02086 613 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 KLF10Q13118 480 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 TRPC3Q13507 836 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 SNAP47Q5SQN1 464 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 NEK5Q6P3R8 708 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 CCDC60Q8IWA6 550 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 CCDC28AQ8IWP9 274 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 GPRASP2Q96D09 838 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 CNDP2Q96KP4 475 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 RIT2Q99578 217 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 TEKT3Q9BXF9 490 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 SLC4A5Q9BY07 1137 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 MAGEE1Q9HCI5 957 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 GIMAP4Q9NUV9 329 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 STMN3Q9NZ72 180 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 NOCTQ9UK39 431 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 UGT2A1Q9Y4X1 527 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 CEP350Q5VT06 3117 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 SPATA31C2B4DYI2 1134 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 SNPHO15079 494 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 ZBTB14O43829 449 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 MED24O75448 989 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 TOM1L1O75674 476 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 FAM155BO75949 473 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 MYL4P12829 197 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 NCAM1P13591 858 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 CD1EP15812 388 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 ITIH1P19827 911 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 GPD2P43304 727 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 DLG2Q15700 870 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 MTX3Q5HYI7 312 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 VWA5B1Q5TIE3 1220 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 ANKRD22Q5VYY1 191 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 ZCCHC8Q6NZY4 707 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 B3GNT9Q6UX72 402 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 POLNQ7Z5Q5 900 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 CATSPER3Q86XQ3 398 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 ARMC8Q8IUR7 673 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 ARHGEF19Q8IW93 802 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 DSELQ8IZU8 1212 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 NPLOC4Q8TAT6 608 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 ZSCAN18Q8TBC5 510 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 RASSF5Q8WWW0 418 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 USP13Q92995 863 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 CSF3RQ99062 836 aa9.61□□□□□ -0.87
CTNNA1-243ENST00000540387 MRPL9Q9BYD2 267 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms