RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 PRSS51A0A1B0GVH4 220 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 PENKP01210 267 aaPredicted RBP20.61■□□□□ 0.89
TMEM260-203ENST00000539559 CYP2C8P10632 490 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 GLUD2P49448 558 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 GALK1P51570 392 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 RALGDSQ12967 914 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 TMEM135Q86UB9 458 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 SLC41A1Q8IVJ1 513 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 PGAM4Q8N0Y7 254 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 TMEM102Q8N9M5 508 aaPredicted RBP20.61■□□□□ 0.89
TMEM260-203ENST00000539559 GTF3C2Q8WUA4 911 aaPredicted RBP20.61■□□□□ 0.89
TMEM260-203ENST00000539559 DRC3Q9H069 523 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 CDYLQ9Y232 598 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 SNX10Q9Y5X0 201 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 M0QYT0 321 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 SETSIPP0DME0 302 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 USP10Q14694 798 aaKnown RBP20.61■□□□□ 0.89
TMEM260-203ENST00000539559 KIZQ2M2Z5 673 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 HFE2Q6ZVN8 426 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 PSTKQ8IV42 348 aaKnown RBP20.61■□□□□ 0.89
TMEM260-203ENST00000539559 LRTOMTQ8WZ04 291 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 ISL2Q96A47 359 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 EME1Q96AY2 570 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 CNDP1Q96KN2 507 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 MLPHQ9BV36 600 aaPredicted RBP20.61■□□□□ 0.89
TMEM260-203ENST00000539559 ZNF696Q9H7X3 374 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 RNF11Q9Y3C5 154 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 TCAF2A6NFQ2 919 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 ACOT8O14734 319 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 MAGEB3O15480 346 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 PFDN1O60925 122 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 BEST1O76090 585 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 MPOP05164 745 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 MATKP42679 507 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 LIPMQ5VYY2 423 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 CYP2R1Q6VVX0 501 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 FSTL5Q8N475 847 aaPredicted RBP20.61■□□□□ 0.89
TMEM260-203ENST00000539559 ADCY4Q8NFM4 1077 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 COQ10BQ9H8M1 238 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 GMPR2Q9P2T1 348 aaKnown RBP20.61■□□□□ 0.89
TMEM260-203ENST00000539559 GTF2IRD1Q9UHL9 959 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 ADAM28Q9UKQ2 775 aa20.61■□□□□ 0.89
TMEM260-203ENST00000539559 EEF2KO00418 725 aaKnown RBP20.6■□□□□ 0.89
TMEM260-203ENST00000539559 TOMM70O94826 608 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 CD68P34810 354 aaPredicted RBP20.6■□□□□ 0.89
TMEM260-203ENST00000539559 APOFQ13790 326 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 ZNF280DQ6N043 979 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 EXOC8Q8IYI6 725 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 ANKRD52Q8NB46 1076 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 FAM110BQ8TC76 370 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 SREK1Q8WXA9 508 aaKnown RBP20.6■□□□□ 0.89
TMEM260-203ENST00000539559 ABTB1Q969K4 478 aaPredicted RBP20.6■□□□□ 0.89
TMEM260-203ENST00000539559 C1QTNF1Q9BXJ1 281 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 ZBTB26Q9HCK0 441 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 PIGVQ9NUD9 493 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 TLK1Q9UKI8 766 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 DMTF1Q9Y222 760 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 SHROOM3Q8TF72 1996 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 NEMP2A6NFY4 417 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 I6L893 689 aaPredicted RBP20.6■□□□□ 0.89
TMEM260-203ENST00000539559 BCAS2O75934 225 aaPredicted RBP20.6■□□□□ 0.89
TMEM260-203ENST00000539559 HNRNPLP14866 589 aaKnown RBP eCLIP20.6■□□□□ 0.89
TMEM260-203ENST00000539559 NSUN2Q08J23 767 aaKnown RBP eCLIP20.6■□□□□ 0.89
TMEM260-203ENST00000539559 ZBTB17Q13105 803 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 PTK2BQ14289 1009 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 MGAT5BQ3V5L5 792 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 LAYNQ6UX15 382 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 ZYG11AQ6WRX3 759 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 ZNF410Q86VK4 478 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 ZDHHC17Q8IUH5 632 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 MYO1HQ8N1T3 1032 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 NPWQ8N729 165 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 ZFRQ96KR1 1074 aaKnown RBP20.6■□□□□ 0.89
TMEM260-203ENST00000539559 EIF2AQ9BY44 585 aaKnown RBP20.6■□□□□ 0.89
TMEM260-203ENST00000539559 ZNF385DQ9H6B1 395 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 GOLGA2P5Q9HBQ8 144 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 IGSF9Q9P2J2 1179 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 XPR1Q9UBH6 696 aa20.6■□□□□ 0.89
TMEM260-203ENST00000539559 SPTLC1O15269 473 aa20.59■□□□□ 0.89
TMEM260-203ENST00000539559 DLX3O60479 287 aa20.59■□□□□ 0.89
TMEM260-203ENST00000539559 AP2A1O95782 977 aa20.59■□□□□ 0.89
TMEM260-203ENST00000539559 ERCC2P18074 760 aa20.59■□□□□ 0.89
TMEM260-203ENST00000539559 BCAT1P54687 386 aa20.59■□□□□ 0.89
TMEM260-203ENST00000539559 ZFP1Q6P2D0 407 aa20.59■□□□□ 0.89
TMEM260-203ENST00000539559 PIGZQ86VD9 579 aa20.59■□□□□ 0.89
TMEM260-203ENST00000539559 PNPLA1Q8N8W4 532 aa20.59■□□□□ 0.89
TMEM260-203ENST00000539559 GPRC5AQ8NFJ5 357 aa20.59■□□□□ 0.89
TMEM260-203ENST00000539559 USP33Q8TEY7 942 aa20.59■□□□□ 0.89
TMEM260-203ENST00000539559 EFCAB1Q9HAE3 211 aa20.59■□□□□ 0.89
TMEM260-203ENST00000539559 PRDM16Q9HAZ2 1276 aa20.59■□□□□ 0.89
TMEM260-203ENST00000539559 KLK14Q9P0G3 267 aa20.59■□□□□ 0.89
TMEM260-203ENST00000539559 CEPT1Q9Y6K0 416 aa20.59■□□□□ 0.89
TMEM260-203ENST00000539559 PDLIM1O00151 329 aa20.59■□□□□ 0.89
TMEM260-203ENST00000539559 MT-CO1P00395 513 aa20.59■□□□□ 0.89
TMEM260-203ENST00000539559 ZNF26P17031 533 aaPredicted RBP20.59■□□□□ 0.89
TMEM260-203ENST00000539559 NFKB1P19838 968 aa20.59■□□□□ 0.89
TMEM260-203ENST00000539559 AKAP5P24588 427 aa20.59■□□□□ 0.89
TMEM260-203ENST00000539559 CCNA1P78396 465 aa20.59■□□□□ 0.89
TMEM260-203ENST00000539559 COG7P83436 770 aa20.59■□□□□ 0.89
TMEM260-203ENST00000539559 CTBP1Q13363 440 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms