RNA–Protein interactions for RNA: ENST00000539271.5

LRTOMT-216, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4 BASIC

Gene LRTOMT, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-216ENST00000539271 SERINC3Q13530 473 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 DPYSQ14117 519 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 SMTNL2Q2TAL5 461 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 KCNT1Q5JUK3 1230 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 WDR45BQ5MNZ6 344 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 SYCP2LQ5T4T6 812 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 FAM46CQ5VWP2 391 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 AFMIDQ63HM1 303 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 TXNRD3NBQ6F5E7 133 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 TCEAL6Q6IPX3 200 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 DPY19L3Q6ZPD9 716 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 POLNQ7Z5Q5 900 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 PCDH20Q8N6Y1 951 aaKnown RBP9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 C12orf50Q8NA57 414 aaPredicted RBP9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 CHST14Q8NCH0 376 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 PIP4K2CQ8TBX8 421 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 GANCQ8TET4 914 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 DNASE2BQ8WZ79 361 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 TCEAL3Q969E4 200 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 FAM131CQ96AQ9 280 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 ISG20Q96AZ6 181 aaKnown RBP9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 HMCESQ96FZ2 354 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 CCDC114Q96M63 670 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 PANX2Q96RD6 677 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 OMDQ99983 421 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 ANP32EQ9BTT0 268 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 KLC2Q9H0B6 622 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 NEUROG2Q9H2A3 272 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 TNKS2Q9H2K2 1166 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 C6orf106Q9H6K1 298 aaPredicted RBP9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 LRRC19Q9H756 370 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 ZWILCHQ9H900 591 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 OSGEPQ9NPF4 335 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 CWC15Q9P013 229 aaKnown RBP9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 EVLQ9UI08 416 aaPredicted RBP9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 LCMT1Q9UIC8 334 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 SARDHQ9UL12 918 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 INTUQ9ULD6 942 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 FZD4Q9ULV1 537 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 HPCAL4Q9UM19 191 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 NCKAP1Q9Y2A7 1128 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 FCF1Q9Y324 198 aaKnown RBP9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 ACTL7AQ9Y615 435 aa9.16□□□□□ -0.94
LRTOMT-216ENST00000539271 SHROOM3Q8TF72 1996 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 PCDH15Q96QU1 1955 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 MEI4A8MW99 385 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 PATE3B3GLJ2 98 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 C10orf142B7Z368 130 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 C1QTNF3-AMACRE9PGA6 284 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 H3BRJ5 948 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 KHNYNO15037 678 aaKnown RBP9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 DAPK3O43293 454 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 BUB1O43683 1085 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 BNIP3LO60238 219 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 GDF9O60383 454 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 RNASEH2AO75792 299 aaKnown RBP9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 LCA5LO95447 670 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 PRNPP04156 253 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 CHRNA3P32297 505 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 MAN1A1P33908 653 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 ARL4AP40617 200 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 RECQLP46063 649 aaPredicted RBP9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 ID4P47928 161 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 METAP1P53582 386 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 TCEAL1Q15170 157 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 HADHQ16836 314 aaKnown RBP9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 DUOXA1Q1HG43 343 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 AASDHQ4L235 1098 aaPredicted RBP9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 TRIM61Q5EBN2 209 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 CARD16Q5EG05 197 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 DCAF12L1Q5VU92 463 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 SLC23A3Q6PIS1 610 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 RABEPKQ7Z6M1 372 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 CPNE8Q86YQ8 564 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 ARHGAP12Q8IWW6 846 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 RHOT2Q8IXI1 618 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 PLPP6Q8IY26 295 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 CCDC170Q8IYT3 715 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 HDDC3Q8N4P3 179 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 NPWQ8N729 165 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 TMIEQ8NEW7 156 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 CEP76Q8TAP6 659 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 SLC35G2Q8TBE7 412 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 FAM71BQ8TC56 605 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 NETO1Q8TDF5 533 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 CASKIN2Q8WXE0 1202 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 RFFLQ8WZ73 363 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 TSC1Q92574 1164 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 HSPH1Q92598 858 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 CELF6Q96J87 481 aaKnown RBP9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 CSPG4P5Q96PW8 444 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 PCDH18Q9HCL0 1135 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 RXFP3Q9NSD7 469 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 WASF2Q9Y6W5 498 aa9.15□□□□□ -0.94
LRTOMT-216ENST00000539271 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.14□□□□□ -0.95
LRTOMT-216ENST00000539271 LNP1A1A4G5 178 aa9.14□□□□□ -0.95
LRTOMT-216ENST00000539271 ARHGAP42A6NI28 874 aa9.14□□□□□ -0.95
LRTOMT-216ENST00000539271 LRRC72A6NJI9 287 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms