RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 RGMBQ6NW40 437 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 PKN3Q6P5Z2 889 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 DNAJC9Q8WXX5 260 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 CATSPERBQ9H7T0 1116 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 NYNRINQ9P2P1 1898 aaKnown RBP25.29■■□□□ 1.64
RAB40C-204ENST00000538492 MYLKQ15746 1914 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 B4GALT3O60512 393 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 TRIM13O60858 407 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 ADAMTS4O75173 837 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 CIB2O75838 187 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 VHLP40337 213 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 FLT3LGP49771 235 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 ESRP1Q6NXG1 681 aaKnown RBP25.29■■□□□ 1.64
RAB40C-204ENST00000538492 SLC25A41Q8N5S1 370 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 FCRL5Q96RD9 977 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 IL12RB2Q99665 862 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 FTHL17Q9BXU8 183 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 C1orf21Q9H246 121 aa25.29■■□□□ 1.64
RAB40C-204ENST00000538492 ABI2Q9NYB9 513 aaPredicted RBP25.29■■□□□ 1.64
RAB40C-204ENST00000538492 A0A1W2PQH9 124 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 AP3B1O00203 1094 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 MATN3O15232 486 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 NVLO15381 856 aaKnown RBP25.28■■□□□ 1.64
RAB40C-204ENST00000538492 SEPT4O43236 478 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 PSMD3O43242 534 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 HLA-DQB2P05538 268 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 ABL2P42684 1182 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 MPP1Q00013 466 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 ZNF460Q14592 562 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 DENND5AQ6IQ26 1287 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 C14orf80Q86SX3 495 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 CFAP61Q8NHU2 1237 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 GATA5Q9BWX5 397 aaPredicted RBP25.28■■□□□ 1.64
RAB40C-204ENST00000538492 ACE2Q9BYF1 805 aaPredicted RBP25.28■■□□□ 1.64
RAB40C-204ENST00000538492 CDH19Q9H159 772 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 RHOJQ9H4E5 214 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 FAM96AQ9H5X1 160 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 RBM22Q9NW64 420 aaKnown RBP eCLIP25.28■■□□□ 1.64
RAB40C-204ENST00000538492 STX18Q9P2W9 335 aaKnown RBP25.28■■□□□ 1.64
RAB40C-204ENST00000538492 SLC2A6Q9UGQ3 507 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 CDY1Q9Y6F8 540 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 MYO16Q9Y6X6 1858 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 ANXA9O76027 345 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 SLC9B1Q4ZJI4 515 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 MANEALQ5VSG8 457 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 C1orf146Q5VVC0 180 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 NET1Q7Z628 596 aaPredicted RBP25.28■■□□□ 1.64
RAB40C-204ENST00000538492 SAPCD2Q86UD0 394 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 SLC41A1Q8IVJ1 513 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 PHTF2Q8N3S3 785 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 MAPK15Q8TD08 544 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 GEMIN8Q9NWZ8 242 aaKnown RBP25.28■■□□□ 1.64
RAB40C-204ENST00000538492 OSER1Q9NX31 292 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 NOD1Q9Y239 953 aa25.28■■□□□ 1.64
RAB40C-204ENST00000538492 PATJQ8NI35 1801 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 LOC100653049A0A140TA62 436 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 E9PBE3 544 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 FGF10O15520 208 aaPredicted RBP25.27■■□□□ 1.64
RAB40C-204ENST00000538492 KLHL41O60662 606 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 KRT34O76011 436 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 CHRNGP07510 517 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 ATP6V1C1P21283 382 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 CCR10P46092 362 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 COPAP53621 1224 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 PEX6Q13608 980 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 TSNAXIP1Q2TAA8 658 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 RALGPS1Q5JS13 557 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 ARTNQ5T4W7 220 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 LRRC74BQ6ZQY2 392 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 BEND5Q7L4P6 421 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 ZNF280BQ86YH2 543 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 KCTD4Q8WVF5 259 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 FSD1LQ9BXM9 530 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 HS3ST4Q9Y661 456 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 DCXO43602 365 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 CACNB2Q08289 660 aaPredicted RBP25.27■■□□□ 1.64
RAB40C-204ENST00000538492 TDRD5Q8NAT2 981 aaKnown RBP25.27■■□□□ 1.64
RAB40C-204ENST00000538492 SREK1Q8WXA9 508 aaKnown RBP25.27■■□□□ 1.64
RAB40C-204ENST00000538492 SCYL1Q96KG9 808 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 PPP1R36Q96LQ0 422 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 C1QTNF1Q9BXJ1 281 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 UNKQ9C0B0 810 aaKnown RBP25.27■■□□□ 1.64
RAB40C-204ENST00000538492 NMRK2Q9NPI5 230 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 OXSMQ9NWU1 459 aa25.27■■□□□ 1.64
RAB40C-204ENST00000538492 E9PAM4 449 aa25.26■■□□□ 1.63
RAB40C-204ENST00000538492 HOXC13P31276 330 aa25.26■■□□□ 1.63
RAB40C-204ENST00000538492 CHRNA4P43681 627 aa25.26■■□□□ 1.63
RAB40C-204ENST00000538492 C6orf163Q5TEZ5 329 aa25.26■■□□□ 1.63
RAB40C-204ENST00000538492 KLHDC8BQ8IXV7 354 aa25.26■■□□□ 1.63
RAB40C-204ENST00000538492 SPATA6LQ8N4H0 392 aa25.26■■□□□ 1.63
RAB40C-204ENST00000538492 ZNF333Q96JL9 665 aa25.26■■□□□ 1.63
RAB40C-204ENST00000538492 RUVBL2Q9Y230 463 aaKnown RBP25.26■■□□□ 1.63
RAB40C-204ENST00000538492 A0A088AWK7 358 aa25.26■■□□□ 1.63
RAB40C-204ENST00000538492 NEBLO76041 1014 aa25.26■■□□□ 1.63
RAB40C-204ENST00000538492 SLC35E2BP0CK96 405 aa25.26■■□□□ 1.63
RAB40C-204ENST00000538492 CCND3P30281 292 aaPredicted RBP25.26■■□□□ 1.63
RAB40C-204ENST00000538492 PAPOLAP51003 745 aaKnown RBP25.26■■□□□ 1.63
RAB40C-204ENST00000538492 EPGNQ6UW88 154 aa25.26■■□□□ 1.63
RAB40C-204ENST00000538492 LZTR1Q8N653 840 aa25.26■■□□□ 1.63
RAB40C-204ENST00000538492 PPHLN1Q8NEY8 458 aaKnown RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms