RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 NCKIPSDQ9NZQ3 722 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 ADAM28Q9UKQ2 775 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 DSEQ9UL01 958 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 DNAJC16Q9Y2G8 782 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 SUGT1Q9Y2Z0 365 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 PCDHB12Q9Y5F1 795 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 PTPRFP10586 1907 aa6.82□□□□□ -1.32
USP28-207ENST00000538475 ISPDA4D126 451 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 TBKBP1A7MCY6 615 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 KPNA7A9QM74 516 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 ZNF487B1APH4 448 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 CLDN25C9JDP6 229 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 H3BMQ9 156 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 ACOT8O14734 319 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 MEIS2O14770 477 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 UGT1A9O60656 530 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 PLIN3O60664 434 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 PPP1R11O60927 126 aaPredicted RBP6.81□□□□□ -1.32
USP28-207ENST00000538475 FARP2O94887 1054 aaPredicted RBP6.81□□□□□ -1.32
USP28-207ENST00000538475 CPNE6O95741 557 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 BCL10O95999 233 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 MYL3P08590 195 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 HSPA1AP0DMV8 641 aaKnown RBP6.81□□□□□ -1.32
USP28-207ENST00000538475 HSPA1BP0DMV9 641 aaKnown RBP6.81□□□□□ -1.32
USP28-207ENST00000538475 HSPA8P11142 646 aaKnown RBP6.81□□□□□ -1.32
USP28-207ENST00000538475 FGF3P11487 239 aaPredicted RBP6.81□□□□□ -1.32
USP28-207ENST00000538475 FCGR1AP12314 374 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 P4HA1P13674 534 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 ATF7P17544 494 aaPredicted RBP6.81□□□□□ -1.32
USP28-207ENST00000538475 UGT1A6P19224 532 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 TPSB2P20231 275 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 CCNA2P20248 432 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 GARTP22102 1010 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 UGT1A1P22309 533 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 UGT1A4P22310 534 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 TKTP29401 623 aaKnown RBP6.81□□□□□ -1.32
USP28-207ENST00000538475 RFC1P35251 1148 aaPredicted RBP6.81□□□□□ -1.32
USP28-207ENST00000538475 UGT1A3P35503 534 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 UGT1A5P35504 534 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 ZNF76P36508 570 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 STAT3P40763 770 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 PREPP48147 710 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 CCR3P51677 355 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 BMXP51813 675 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 ABCE1P61221 599 aaKnown RBP6.81□□□□□ -1.32
USP28-207ENST00000538475 YWHAGP61981 247 aaKnown RBP eCLIP6.81□□□□□ -1.32
USP28-207ENST00000538475 MPP1Q00013 466 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 OCA2Q04671 838 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 KRR1Q13601 381 aaKnown RBP6.81□□□□□ -1.32
USP28-207ENST00000538475 TFDP2Q14188 446 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 TRIM25Q14258 630 aaKnown RBP6.81□□□□□ -1.32
USP28-207ENST00000538475 PTK2BQ14289 1009 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 FRG1Q14331 258 aaKnown RBP6.81□□□□□ -1.32
USP28-207ENST00000538475 COG2Q14746 738 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 TPSAB1Q15661 275 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 ZNF394Q53GI3 561 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 FAM47CQ5HY64 1035 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 NHSL2Q5HYW2 709 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 EXOSC6Q5RKV6 272 aaKnown RBP6.81□□□□□ -1.32
USP28-207ENST00000538475 C6orf52Q5T4I8 152 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 EGFLAMQ63HQ2 1017 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 LMBRD2Q68DH5 695 aaPredicted RBP6.81□□□□□ -1.32
USP28-207ENST00000538475 ITPRIPL1Q6GPH6 555 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 C15orf39Q6ZRI6 1047 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 FRMD7Q6ZUT3 714 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 NIPA1Q7RTP0 329 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 SLC51AQ86UW1 340 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 CPNE8Q86YQ8 564 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 DSELQ8IZU8 1212 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 NDUFAF2Q8N183 169 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 FIBCD1Q8N539 461 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 TTC39CQ8N584 583 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 GSDMBQ8TAX9 411 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 RDH11Q8TC12 318 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 CALML6Q8TD86 181 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 CDKL2Q92772 493 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 ZUFSPQ96AP4 578 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 VMP1Q96GC9 406 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 COG8Q96MW5 612 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 PSMG3-AS1Q96PY0 264 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 WRNIP1Q96S55 665 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 APOL6Q9BWW8 343 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 SLC13A1Q9BZW2 595 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 CDH19Q9H159 772 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 ZNF576Q9H609 170 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 CAAP1Q9H8G2 361 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 SP140LQ9H930 580 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 RSAD1Q9HA92 442 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 UGT1A7Q9HAW7 530 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 UGT1A10Q9HAW8 530 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 UGT1A8Q9HAW9 530 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 ZFYVE1Q9HBF4 777 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 CPNE5Q9HCH3 593 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 ALG13Q9NP73 1137 aaKnown RBP6.81□□□□□ -1.32
USP28-207ENST00000538475 ARMC1Q9NVT9 282 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 TRNAU1APQ9NX07 287 aaKnown RBP6.81□□□□□ -1.32
USP28-207ENST00000538475 COPG2Q9UBF2 871 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 CRNNQ9UBG3 495 aaPredicted RBP6.81□□□□□ -1.32
USP28-207ENST00000538475 SERPINB13Q9UIV8 391 aa6.81□□□□□ -1.32
USP28-207ENST00000538475 SARDHQ9UL12 918 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms