RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ZNF195O14628 629 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 GYG2O15488 501 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 ALOX15P16050 662 aaPredicted RBP14.23□□□□□ -0.13
LIMK1-208ENST00000538333 ARCN1P48444 511 aaKnown RBP14.23□□□□□ -0.13
LIMK1-208ENST00000538333 ABCE1P61221 599 aaKnown RBP14.23□□□□□ -0.13
LIMK1-208ENST00000538333 ITGA9Q13797 1035 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 GRM3Q14832 879 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 POU6F1Q14863 301 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 RFWD3Q6PCD5 774 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 RANBP10Q6VN20 620 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 PAXIP1Q6ZW49 1069 aaPredicted RBP14.23□□□□□ -0.13
LIMK1-208ENST00000538333 SH3TC2Q8TF17 1288 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 MRGPRX2Q96LB1 330 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 PPP1R2P1Q96PQ5 205 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 ENTPD7Q9NQZ7 604 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 NOP53Q9NZM5 478 aaKnown RBP14.23□□□□□ -0.13
LIMK1-208ENST00000538333 GMIPQ9P107 970 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 IPO11Q9UI26 975 aaKnown RBP14.23□□□□□ -0.13
LIMK1-208ENST00000538333 PCDHB5Q9Y5E4 795 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 BPTFQ12830 3046 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 SLC2A3P11169 496 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 HADHAP40939 763 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 RABGAP1LQ5R372 815 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 POTEHQ6S545 545 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 UMODL1-AS1Q8N2C9 162 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 ATAD1Q8NBU5 361 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 PTCD2Q8WV60 388 aaKnown RBP14.23□□□□□ -0.13
LIMK1-208ENST00000538333 C1QTNF1Q9BXJ1 281 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 MRM3Q9HC36 420 aaKnown RBP14.23□□□□□ -0.13
LIMK1-208ENST00000538333 TMEM161AQ9NX61 479 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 TCAF1Q9Y4C2 921 aa14.23□□□□□ -0.13
LIMK1-208ENST00000538333 A0A1W2PQ45 241 aaPredicted RBP14.22□□□□□ -0.13
LIMK1-208ENST00000538333 A0A1W2PQY0 241 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 VGLL3A8MV65 326 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 TADA2AO75478 443 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 AHSGP02765 367 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 TBX4P57082 545 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 ANO4Q32M45 955 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 MS4A13Q5J8X5 152 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 ESRP1Q6NXG1 681 aaKnown RBP14.22□□□□□ -0.13
LIMK1-208ENST00000538333 ARHGAP18Q8N392 663 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 TMEM151AQ8N4L1 468 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 TEX9Q8N6V9 391 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 ENDOVQ8N8Q3 282 aaKnown RBP14.22□□□□□ -0.13
LIMK1-208ENST00000538333 FATE1Q969F0 183 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 FAM193BQ96PV7 902 aaPredicted RBP14.22□□□□□ -0.13
LIMK1-208ENST00000538333 TSEN34Q9BSV6 310 aaKnown RBP14.22□□□□□ -0.13
LIMK1-208ENST00000538333 FTHL17Q9BXU8 183 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 MMADHCQ9H3L0 296 aaPredicted RBP14.22□□□□□ -0.13
LIMK1-208ENST00000538333 NMRAL1Q9HBL8 299 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 TREX1Q9NSU2 369 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 PNPOQ9NVS9 261 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 MCM8Q9UJA3 840 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 SLC39A10Q9ULF5 831 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 SORCS3Q9UPU3 1222 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 C15orf41Q9Y2V0 281 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 PCDHB12Q9Y5F1 795 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 IGLV3-10A0A075B6K4 115 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 PRR5-ARHGAP8B1AHC4 643 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 AOC2O75106 756 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 SIN3BO75182 1162 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 ENTPD5O75356 428 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 PMPCBO75439 489 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 ENO1P06733 434 aaKnown RBP14.22□□□□□ -0.13
LIMK1-208ENST00000538333 COL6A1P12109 1028 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 RHOQP17081 205 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 CCNG1P51959 295 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 NDST2P52849 883 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 ALDH18A1P54886 795 aaKnown RBP14.22□□□□□ -0.13
LIMK1-208ENST00000538333 ARHGAP8P85298 464 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 TBCCQ15814 346 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 CTXN3Q4LDR2 81 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 LHX8Q68G74 356 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 KDELC1Q6UW63 502 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 NAPRTQ6XQN6 538 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 TTC8Q8TAM2 541 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 PPP4R1Q8TF05 950 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 RILPQ96NA2 401 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 GPR62Q9BZJ7 368 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 TMEM248Q9NWD8 314 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 DNAJC28Q9NX36 388 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 SLC2A6Q9UGQ3 507 aa14.22□□□□□ -0.13
LIMK1-208ENST00000538333 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.21□□□□□ -0.13
LIMK1-208ENST00000538333 VAPBO95292 243 aa14.21□□□□□ -0.13
LIMK1-208ENST00000538333 TPBGLP0DKB5 382 aa14.21□□□□□ -0.13
LIMK1-208ENST00000538333 GNAZP19086 355 aa14.21□□□□□ -0.13
LIMK1-208ENST00000538333 AOC1P19801 751 aa14.21□□□□□ -0.13
LIMK1-208ENST00000538333 CPA2P48052 419 aa14.21□□□□□ -0.13
LIMK1-208ENST00000538333 NOGQ13253 232 aa14.21□□□□□ -0.13
LIMK1-208ENST00000538333 HNRNPDQ14103 355 aaKnown RBP14.21□□□□□ -0.13
LIMK1-208ENST00000538333 ALFQ53S48 1182 aa14.21□□□□□ -0.13
LIMK1-208ENST00000538333 FAM171A1Q5VUB5 890 aa14.21□□□□□ -0.13
LIMK1-208ENST00000538333 DENND6AQ8IWF6 608 aa14.21□□□□□ -0.13
LIMK1-208ENST00000538333 PPHLN1Q8NEY8 458 aaKnown RBP14.21□□□□□ -0.13
LIMK1-208ENST00000538333 FBXO27Q8NI29 283 aa14.21□□□□□ -0.13
LIMK1-208ENST00000538333 GPR152Q8TDT2 470 aa14.21□□□□□ -0.13
LIMK1-208ENST00000538333 OXCT2Q9BYC2 517 aaPredicted RBP14.21□□□□□ -0.13
LIMK1-208ENST00000538333 SLC25A51Q9H1U9 297 aa14.21□□□□□ -0.13
LIMK1-208ENST00000538333 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.21□□□□□ -0.13
LIMK1-208ENST00000538333 CLIC5Q9NZA1 410 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms