RNA–Protein interactions for RNA: ENST00000538315.5

MRPS35-203, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 2 BASIC

Gene MRPS35, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-203ENST00000538315 NEBLO76041 1014 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 TMCC1O94876 653 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 CD160O95971 181 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 VAV1P15498 845 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 COL9A1P20849 921 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 RECQLP46063 649 aaPredicted RBP11.49□□□□□ -0.57
MRPS35-203ENST00000538315 VASPP50552 380 aaPredicted RBP11.49□□□□□ -0.57
MRPS35-203ENST00000538315 DGKEP52429 567 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 RHOAP61586 193 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 OTUD4Q01804 1114 aaKnown RBP11.49□□□□□ -0.57
MRPS35-203ENST00000538315 INO80DQ53TQ3 878 aaPredicted RBP11.49□□□□□ -0.57
MRPS35-203ENST00000538315 TMCO4Q5TGY1 634 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 TIGD7Q6NT04 549 aaPredicted RBP11.49□□□□□ -0.57
MRPS35-203ENST00000538315 KIAA1211LQ6NV74 962 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 B4GALNT4Q76KP1 1039 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 ZC3H18Q86VM9 953 aaKnown RBP11.49□□□□□ -0.57
MRPS35-203ENST00000538315 SLC13A5Q86YT5 568 aaPredicted RBP11.49□□□□□ -0.57
MRPS35-203ENST00000538315 TSTD1Q8NFU3 115 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 ACTL9Q8TC94 416 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 FRS2Q8WU20 508 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 CASKIN2Q8WXE0 1202 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 PTPRN2Q92932 1015 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 HDAC11Q96DB2 347 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 CCDC114Q96M63 670 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 C16orf45Q96MC5 204 aaPredicted RBP11.49□□□□□ -0.57
MRPS35-203ENST00000538315 HHIPQ96QV1 700 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 FAM118BQ9BPY3 351 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 CINPQ9BW66 212 aaPredicted RBP11.49□□□□□ -0.57
MRPS35-203ENST00000538315 TM6SF2Q9BZW4 377 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 PDFQ9HBH1 243 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 FARP1Q9Y4F1 1045 aaPredicted RBP11.49□□□□□ -0.57
MRPS35-203ENST00000538315 A0A1W2PQF6 199 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 TCRBV7S2A1N4TA0A589 114 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 H7C0C1 242 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 SIN3BO75182 1162 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 FGGP02679 453 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 CCNCP24863 283 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 ATP5OP48047 213 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 ZNF235Q14590 738 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 RFTN1Q14699 578 aaPredicted RBP11.49□□□□□ -0.57
MRPS35-203ENST00000538315 LBRQ14739 615 aaKnown RBP11.49□□□□□ -0.57
MRPS35-203ENST00000538315 CACUL1Q86Y37 369 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 C1orf210Q8IVY1 113 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 CCDC13Q8IYE1 715 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 PGBD3Q8N328 593 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 BBS5Q8N3I7 341 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 RYBPQ8N488 228 aaPredicted RBP11.49□□□□□ -0.57
MRPS35-203ENST00000538315 PCDH20Q8N6Y1 951 aaKnown RBP11.49□□□□□ -0.57
MRPS35-203ENST00000538315 TTC13Q8NBP0 860 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 HMGB4Q8WW32 186 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 PBKQ96KB5 322 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 ZNF599Q96NL3 588 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 OLFM3Q96PB7 478 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 OSBPL9Q96SU4 736 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 LRFN3Q9BTN0 628 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 CEP44Q9C0F1 390 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 PRSS16Q9NQE7 514 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 SEPT10Q9P0V9 454 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 BCCIPQ9P287 314 aaKnown RBP eCLIP11.49□□□□□ -0.57
MRPS35-203ENST00000538315 SNX12Q9UMY4 172 aa11.49□□□□□ -0.57
MRPS35-203ENST00000538315 ZNF318Q5VUA4 2279 aa11.48□□□□□ -0.57
MRPS35-203ENST00000538315 ANKRD36A6QL64 1941 aa11.48□□□□□ -0.57
MRPS35-203ENST00000538315 TARSL2A2RTX5 802 aaKnown RBP11.48□□□□□ -0.57
MRPS35-203ENST00000538315 MCF2LO15068 1137 aa11.48□□□□□ -0.57
MRPS35-203ENST00000538315 MATN3O15232 486 aa11.48□□□□□ -0.57
MRPS35-203ENST00000538315 ALDH1A2O94788 518 aa11.48□□□□□ -0.57
MRPS35-203ENST00000538315 CASQ1P31415 396 aa11.48□□□□□ -0.57
MRPS35-203ENST00000538315 EIF3EP60228 445 aaKnown RBP11.48□□□□□ -0.57
MRPS35-203ENST00000538315 SNRPD1P62314 119 aaKnown RBP11.48□□□□□ -0.57
MRPS35-203ENST00000538315 ETF1P62495 437 aaKnown RBP11.48□□□□□ -0.57
MRPS35-203ENST00000538315 PPIDQ08752 370 aaKnown RBP11.48□□□□□ -0.57
MRPS35-203ENST00000538315 SLC10A7Q0GE19 358 aa11.48□□□□□ -0.57
MRPS35-203ENST00000538315 KLF1Q13351 362 aaPredicted RBP11.48□□□□□ -0.57
MRPS35-203ENST00000538315 CAMK2GQ13555 558 aaPredicted RBP11.48□□□□□ -0.57
MRPS35-203ENST00000538315 NOMO1Q15155 1222 aa11.48□□□□□ -0.57
MRPS35-203ENST00000538315 CYTH1Q15438 398 aa11.48□□□□□ -0.57
MRPS35-203ENST00000538315 LONRF2Q1L5Z9 754 aa11.48□□□□□ -0.57
MRPS35-203ENST00000538315 C9orf64Q5T6V5 341 aa11.48□□□□□ -0.57
MRPS35-203ENST00000538315 MARC1Q5VT66 337 aa11.48□□□□□ -0.57
MRPS35-203ENST00000538315 ANO7Q6IWH7 933 aa11.48□□□□□ -0.57
MRPS35-203ENST00000538315 SYT10Q6XYQ8 523 aa11.48□□□□□ -0.57
MRPS35-203ENST00000538315 STK40Q8N2I9 435 aa11.48□□□□□ -0.57
MRPS35-203ENST00000538315 TSEN2Q8NCE0 465 aaKnown RBP11.48□□□□□ -0.57
MRPS35-203ENST00000538315 TFB1MQ8WVM0 346 aaKnown RBP11.48□□□□□ -0.57
MRPS35-203ENST00000538315 ISG20Q96AZ6 181 aaKnown RBP11.48□□□□□ -0.57
MRPS35-203ENST00000538315 EXOC2Q96KP1 924 aa11.48□□□□□ -0.57
MRPS35-203ENST00000538315 TSGA13Q96PP4 275 aa11.48□□□□□ -0.57
MRPS35-203ENST00000538315 BRD8Q9H0E9 1235 aa11.48□□□□□ -0.57
MRPS35-203ENST00000538315 SEPT3Q9UH03 358 aa11.48□□□□□ -0.57
MRPS35-203ENST00000538315 TTLL3Q9Y4R7 772 aa11.48□□□□□ -0.57
MRPS35-203ENST00000538315 KCNK1O00180 336 aa11.47□□□□□ -0.57
MRPS35-203ENST00000538315 RNASEH1O60930 286 aaKnown RBP11.47□□□□□ -0.57
MRPS35-203ENST00000538315 ZNF821O75541 412 aaPredicted RBP11.47□□□□□ -0.57
MRPS35-203ENST00000538315 IGSF6O95976 241 aa11.47□□□□□ -0.57
MRPS35-203ENST00000538315 RBP3P10745 1247 aa11.47□□□□□ -0.57
MRPS35-203ENST00000538315 CCNB1P14635 433 aa11.47□□□□□ -0.57
MRPS35-203ENST00000538315 TCP1P17987 556 aaKnown RBP11.47□□□□□ -0.57
MRPS35-203ENST00000538315 MMP13P45452 471 aa11.47□□□□□ -0.57
MRPS35-203ENST00000538315 PXNP49023 591 aaPredicted RBP11.47□□□□□ -0.57
MRPS35-203ENST00000538315 RENBPP51606 427 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms