RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 SLC1A6P48664 564 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 PEX5P50542 639 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 COPAP53621 1224 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 GRSF1Q12849 480 aaKnown RBP eCLIP5.43□□□□□ -1.54
LRP6-203ENST00000538239 SPIDRQ14159 915 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 PCID2Q5JVF3 399 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 RBM43Q6ZSC3 357 aaKnown RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 VN1R5Q7Z5H4 357 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 OR56A4Q8NGH8 313 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 RIN3Q8TB24 985 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 WRAP53Q9BUR4 548 aaKnown RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 SEMA4BQ9NPR2 832 aaPredicted RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 SIK3Q9Y2K2 1263 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 SLC45A1Q9Y2W3 748 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 DLG5Q8TDM6 1919 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 A0A096LPK6 155 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 A0A0A0MRY4 1105 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 A0A0B4J269 797 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 SYN3O14994 580 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 CST3P01034 146 aaPredicted RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 TARSP26639 723 aaKnown RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 RRM2P31350 389 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 MAPK8P45983 427 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 IL2P60568 153 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 UBE3AQ05086 875 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 KBTBD12Q3ZCT8 623 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 ZACNQ401N2 412 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 MIIPQ5JXC2 388 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 SH3RF1Q7Z6J0 888 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 CYP4Z1Q86W10 505 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 PARGQ86W56 976 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 C2orf73Q8N5S3 287 aaPredicted RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 ST13P5Q8NFI4 369 aaPredicted RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 NSL1Q96IY1 281 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 SPATA13Q96N96 652 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 ZFP14Q9HCL3 533 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 TXNRD2Q9NNW7 524 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 KLF15Q9UIH9 416 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 PCDHA11Q9Y5I1 949 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 TLL2Q9Y6L7 1015 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 A0A088AWK7 358 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 TMEM114B3SHH9 223 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 EIF3HO15372 352 aaKnown RBP eCLIP5.43□□□□□ -1.542e-6■■■■□ 19.7
LRP6-203ENST00000538239 TGFB1I1O43294 461 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 FTH1P02794 183 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 ZNF10P21506 573 aaPredicted RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 AQP5P55064 265 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 HNRNPH2P55795 449 aaKnown RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 RPL7AP62424 266 aaKnown RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 OCA2Q04671 838 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 RAB30Q15771 203 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 ATAD3BQ5T9A4 648 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 SCARA3Q6AZY7 606 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 VSTM1Q6UX27 236 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 INPP5DQ92835 1189 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 LGMNQ99538 433 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 LPIN3Q9BQK8 851 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 OXCT2Q9BYC2 517 aaPredicted RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 ALG9Q9H6U8 611 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 HEY2Q9UBP5 337 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 ENTPD4Q9Y227 616 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 ZNF536O15090 1300 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 PDE2AO00408 941 aaPredicted RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 B4GALT4O60513 344 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 FSBPO95073 299 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 SH3BGRP55822 239 aaPredicted RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 CYLC2Q14093 348 aaPredicted RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 IL27RAQ6UWB1 636 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 ALLCQ8N6M5 410 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 EFCAB3Q8N7B9 438 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 CEP70Q8NHQ1 597 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 METTL6Q8TCB7 284 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 PCED1BQ96HM7 432 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 VIPAS39Q9H9C1 493 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 CREBZFQ9NS37 354 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 IMP3Q9NV31 184 aaKnown RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 EVLQ9UI08 416 aaPredicted RBP5.43□□□□□ -1.54
LRP6-203ENST00000538239 ANKRD6Q9Y2G4 727 aa5.43□□□□□ -1.54
LRP6-203ENST00000538239 KANSL1LA0AUZ9 987 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 TPP1O14773 563 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 BANF1O75531 89 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 LYPLA2O95372 231 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 POU1F1P28069 291 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 GPR15P49685 360 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 SKP1P63208 163 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 NOMO3P69849 1222 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 PAPD7Q5XG87 772 aaKnown RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 METTL3Q86U44 580 aaKnown RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 ECHDC2Q86YB7 292 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 CATSPER1Q8NEC5 780 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 TPD52L3Q96J77 140 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 RNF157Q96PX1 679 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 FANCEQ9HB96 536 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 ZNF214Q9UL59 606 aaPredicted RBP5.42□□□□□ -1.54
LRP6-203ENST00000538239 CPQQ9Y646 472 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 LOC102724159A0A0B4J2E5 919 aa5.42□□□□□ -1.54
LRP6-203ENST00000538239 CFAP73A6NFT4 308 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms