RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 ATP13A1Q9HD20 1204 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 SPTLC3Q9NUV7 552 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 CWC15Q9P013 229 aaKnown RBP8.58□□□□□ -1.04
SPARC-208ENST00000538026 EIF2B4Q9UI10 523 aaKnown RBP8.58□□□□□ -1.04
SPARC-208ENST00000538026 SLC25A13Q9UJS0 675 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 AP4E1Q9UPM8 1137 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 FCF1Q9Y324 198 aaKnown RBP8.58□□□□□ -1.04
SPARC-208ENST00000538026 WASF2Q9Y6W5 498 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 NBEAQ8NFP9 2946 aa8.58□□□□□ -1.04
SPARC-208ENST00000538026 IGF2RP11717 2491 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 SSU72P8A0A1W2PR75 194 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 MED19A0JLT2 244 aaPredicted RBP8.57□□□□□ -1.04
SPARC-208ENST00000538026 ANKRD62A6NC57 917 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 RASA4BC9J798 803 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 J3KR12 359 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 KHNYNO15037 678 aaKnown RBP8.57□□□□□ -1.04
SPARC-208ENST00000538026 ZBTB24O43167 697 aaPredicted RBP8.57□□□□□ -1.04
SPARC-208ENST00000538026 SPINT1O43278 529 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 RASA4O43374 803 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 CBFA2T2O43439 604 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 RAMP2O60895 175 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 NDUFS2O75306 463 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 RNASEH2AO75792 299 aaKnown RBP8.57□□□□□ -1.04
SPARC-208ENST00000538026 DNTTP04053 509 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 WNT1P04628 370 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 SERPINF2P08697 491 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 RARAP10276 462 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 ACADMP11310 421 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 ENGP17813 658 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 ERCC2P18074 760 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 C5AR1P21730 350 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 AMPD1P23109 780 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 CHRNA3P32297 505 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 PCK1P35558 622 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 ZNF75DP51815 510 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 AIF1P55008 147 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 TAS2R40P59535 323 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 PPP2CBP62714 309 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 PPP2CAP67775 309 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 KRT83P78385 493 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 SLC20A2Q08357 652 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 SERINC3Q13530 473 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 PUM1Q14671 1186 aaKnown RBP eCLIP8.57□□□□□ -1.04
SPARC-208ENST00000538026 POLD3Q15054 466 aaPredicted RBP8.57□□□□□ -1.04
SPARC-208ENST00000538026 DPYSL2Q16555 572 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 SMTNL2Q2TAL5 461 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 AASDHQ4L235 1098 aaPredicted RBP8.57□□□□□ -1.04
SPARC-208ENST00000538026 ARSIQ5FYB1 569 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 C22orf39Q6P5X5 142 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 LAYNQ6UX15 382 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.57□□□□□ -1.04
SPARC-208ENST00000538026 POLNQ7Z5Q5 900 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 ZCCHC9Q8N567 271 aaKnown RBP8.57□□□□□ -1.04
SPARC-208ENST00000538026 PIP4K2CQ8TBX8 421 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 FAM71BQ8TC56 605 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 NETO1Q8TDF5 533 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 CELF6Q96J87 481 aaKnown RBP8.57□□□□□ -1.04
SPARC-208ENST00000538026 EDEM2Q9BV94 578 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 BTBD1Q9H0C5 482 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 MAGEH1Q9H213 219 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 RETREG1Q9H6L5 497 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 NHEJ1Q9H9Q4 299 aaPredicted RBP8.57□□□□□ -1.04
SPARC-208ENST00000538026 SGK2Q9HBY8 427 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 OSGEPQ9NPF4 335 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 ANAPC7Q9UJX3 599 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 SLC6A14Q9UN76 642 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 TFR2Q9UP52 801 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 SCINQ9Y6U3 715 aa8.57□□□□□ -1.04
SPARC-208ENST00000538026 A0A1W2PR77 199 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 FAM47DPA6NHR8 397 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 GIPC1O14908 333 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 MUSKO15146 869 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 ALOX15BO15296 676 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 INSIG1O15503 277 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 LATO43561 262 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 BNIP3LO60238 219 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 PRPSAP2O60256 369 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 LEFTY1O75610 366 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 PEX11BO96011 259 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 ADH1BP00325 375 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 ITIH2P19823 946 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 HOXD12P35452 270 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 RGRP47804 291 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 PAPOLAP51003 745 aaKnown RBP8.56□□□□□ -1.04
SPARC-208ENST00000538026 CLCN6P51797 869 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 CCNHP51946 323 aaPredicted RBP8.56□□□□□ -1.04
SPARC-208ENST00000538026 MMRN1Q13201 1228 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 DUOXA1Q1HG43 343 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 CARD16Q5EG05 197 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 ATXN7L2Q5T6C5 722 aaPredicted RBP8.56□□□□□ -1.04
SPARC-208ENST00000538026 KIAA0895LQ68EN5 471 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 IL31Q6EBC2 164 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 RFX8Q6ZV50 586 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 PSTKQ8IV42 348 aaKnown RBP8.56□□□□□ -1.04
SPARC-208ENST00000538026 PLPP6Q8IY26 295 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 RGL4Q8IZJ4 473 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 C12orf50Q8NA57 414 aaPredicted RBP8.56□□□□□ -1.04
SPARC-208ENST00000538026 TMIEQ8NEW7 156 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 OR6K2Q8NGY2 324 aa8.56□□□□□ -1.04
SPARC-208ENST00000538026 OR8D1Q8WZ84 308 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms