RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 PCDH20Q8N6Y1 951 aaKnown RBP16.54■□□□□ 0.24
VAMP1-205ENST00000535927 CHFRQ96EP1 664 aa16.54■□□□□ 0.24
VAMP1-205ENST00000535927 CCDC114Q96M63 670 aa16.54■□□□□ 0.24
VAMP1-205ENST00000535927 PSKH2Q96QS6 385 aa16.54■□□□□ 0.24
VAMP1-205ENST00000535927 IER2Q9BTL4 223 aa16.54■□□□□ 0.24
VAMP1-205ENST00000535927 C11orf16Q9NQ32 467 aa16.54■□□□□ 0.24
VAMP1-205ENST00000535927 ARHGEF3Q9NR81 526 aa16.54■□□□□ 0.24
VAMP1-205ENST00000535927 THAP10Q9P2Z0 257 aaPredicted RBP16.54■□□□□ 0.24
VAMP1-205ENST00000535927 FBXL21Q9UKT6 434 aa16.54■□□□□ 0.24
VAMP1-205ENST00000535927 NYNRINQ9P2P1 1898 aaKnown RBP16.54■□□□□ 0.24
VAMP1-205ENST00000535927 TARSL2A2RTX5 802 aaKnown RBP16.53■□□□□ 0.24
VAMP1-205ENST00000535927 FAM187AA6NFU0 413 aa16.53■□□□□ 0.24
VAMP1-205ENST00000535927 PEX11BO96011 259 aa16.53■□□□□ 0.24
VAMP1-205ENST00000535927 ARF5P84085 180 aa16.53■□□□□ 0.24
VAMP1-205ENST00000535927 ENPP2Q13822 863 aa16.53■□□□□ 0.24
VAMP1-205ENST00000535927 LRRC32Q14392 662 aa16.53■□□□□ 0.24
VAMP1-205ENST00000535927 SDE2Q6IQ49 451 aa16.53■□□□□ 0.24
VAMP1-205ENST00000535927 ALYREFQ86V81 257 aaKnown RBP16.53■□□□□ 0.24
VAMP1-205ENST00000535927 SH2D3CQ8N5H7 860 aa16.53■□□□□ 0.24
VAMP1-205ENST00000535927 ALLCQ8N6M5 410 aa16.53■□□□□ 0.24
VAMP1-205ENST00000535927 CCDC89Q8N998 374 aa16.53■□□□□ 0.24
VAMP1-205ENST00000535927 TEKT5Q96M29 485 aa16.53■□□□□ 0.24
VAMP1-205ENST00000535927 FBRSQ9HAH7 460 aa16.53■□□□□ 0.24
VAMP1-205ENST00000535927 FARP1Q9Y4F1 1045 aaPredicted RBP16.53■□□□□ 0.24
VAMP1-205ENST00000535927 GOLGA6CA6NDK9 693 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 GOLGA6BA6NDN3 693 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 J3KR12 359 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 SGK1O00141 431 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 KCNN4O15554 427 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 PSMD3O43242 534 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 ECEL1O95672 775 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 GOLGA6DP0CG33 693 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 ALADP13716 330 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 RBL1P28749 1068 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 MAGEA9P43362 315 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 MMP13P45452 471 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 SNRPD1P62314 119 aaKnown RBP16.52■□□□□ 0.24
VAMP1-205ENST00000535927 ZXDAP98168 799 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 RAD51Q06609 339 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 ZNF235Q14590 738 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 TMEM215Q68D42 235 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 ALG1LQ6GMV1 187 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 TPRG1Q6ZUI0 275 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 GSTA5Q7RTV2 222 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 ATP11CQ8NB49 1132 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 TTC8Q8TAM2 541 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 LRRC45Q96CN5 670 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 LRIG1Q96JA1 1093 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 SPATA13Q96N96 652 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 CINPQ9BW66 212 aaPredicted RBP16.52■□□□□ 0.24
VAMP1-205ENST00000535927 CIPCQ9C0C6 399 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 RBM12Q9NTZ6 932 aaKnown RBP16.52■□□□□ 0.24
VAMP1-205ENST00000535927 RBM22Q9NW64 420 aaKnown RBP eCLIP16.52■□□□□ 0.24
VAMP1-205ENST00000535927 GOLGA6AQ9NYA3 693 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 PAK5Q9P286 719 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 ATP8A1Q9Y2Q0 1164 aa16.52■□□□□ 0.24
VAMP1-205ENST00000535927 KANSL1LA0AUZ9 987 aa16.51■□□□□ 0.23
VAMP1-205ENST00000535927 PRR33A8MZF0 331 aa16.51■□□□□ 0.23
VAMP1-205ENST00000535927 PRRT4C9JH25 899 aa16.51■□□□□ 0.23
VAMP1-205ENST00000535927 K7EQS6 105 aa16.51■□□□□ 0.23
VAMP1-205ENST00000535927 SMAPO00193 183 aa16.51■□□□□ 0.23
VAMP1-205ENST00000535927 SNAP91O60641 907 aa16.51■□□□□ 0.23
VAMP1-205ENST00000535927 ATG13O75143 517 aa16.51■□□□□ 0.23
VAMP1-205ENST00000535927 GSRP00390 522 aa16.51■□□□□ 0.23
VAMP1-205ENST00000535927 PTPN3P26045 913 aa16.51■□□□□ 0.23
VAMP1-205ENST00000535927 SOX9P48436 509 aa16.51■□□□□ 0.23
VAMP1-205ENST00000535927 KDSRQ06136 332 aa16.51■□□□□ 0.23
VAMP1-205ENST00000535927 SIGLEC14Q08ET2 396 aa16.51■□□□□ 0.23
VAMP1-205ENST00000535927 SNX1Q13596 522 aa16.51■□□□□ 0.23
VAMP1-205ENST00000535927 PON2Q15165 354 aa16.51■□□□□ 0.23
VAMP1-205ENST00000535927 TP53INP2Q8IXH6 220 aa16.51■□□□□ 0.23
VAMP1-205ENST00000535927 ATG4AQ8WYN0 398 aa16.51■□□□□ 0.23
VAMP1-205ENST00000535927 TMEM121Q9BTD3 319 aa16.51■□□□□ 0.23
VAMP1-205ENST00000535927 POLR1EQ9GZS1 481 aaKnown RBP16.51■□□□□ 0.23
VAMP1-205ENST00000535927 PCDH9Q9HC56 1237 aa16.51■□□□□ 0.23
VAMP1-205ENST00000535927 CD320Q9NPF0 282 aa16.51■□□□□ 0.23
VAMP1-205ENST00000535927 VPS45Q9NRW7 570 aa16.51■□□□□ 0.23
VAMP1-205ENST00000535927 COL4A3Q01955 1670 aa16.5■□□□□ 0.23
VAMP1-205ENST00000535927 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.5■□□□□ 0.23
VAMP1-205ENST00000535927 EDDM13A0A1B0GTR0 161 aa16.5■□□□□ 0.23
VAMP1-205ENST00000535927 A0A1W2PQ67 120 aa16.5■□□□□ 0.23
VAMP1-205ENST00000535927 ERI2A8K979 691 aaKnown RBP16.5■□□□□ 0.23
VAMP1-205ENST00000535927 RNF103O00237 685 aa16.5■□□□□ 0.23
VAMP1-205ENST00000535927 ALOX15BO15296 676 aa16.5■□□□□ 0.23
VAMP1-205ENST00000535927 CD160O95971 181 aa16.5■□□□□ 0.23
VAMP1-205ENST00000535927 JCHAINP01591 159 aa16.5■□□□□ 0.23
VAMP1-205ENST00000535927 SRCP12931 536 aa16.5■□□□□ 0.23
VAMP1-205ENST00000535927 FDFT1P37268 417 aa16.5■□□□□ 0.23
VAMP1-205ENST00000535927 KIR2DL1P43626 348 aaPredicted RBP16.5■□□□□ 0.23
VAMP1-205ENST00000535927 RECQLP46063 649 aaPredicted RBP16.5■□□□□ 0.23
VAMP1-205ENST00000535927 DR1Q01658 176 aa16.5■□□□□ 0.23
VAMP1-205ENST00000535927 WASHC5Q12768 1159 aa16.5■□□□□ 0.23
VAMP1-205ENST00000535927 CCINQ13939 588 aa16.5■□□□□ 0.23
VAMP1-205ENST00000535927 PRPSAP1Q14558 356 aa16.5■□□□□ 0.23
VAMP1-205ENST00000535927 PTPRNQ16849 979 aa16.5■□□□□ 0.23
VAMP1-205ENST00000535927 PARP6Q2NL67 630 aa16.5■□□□□ 0.23
VAMP1-205ENST00000535927 ANKRD20A2Q5SQ80 823 aa16.5■□□□□ 0.23
VAMP1-205ENST00000535927 ANKRD20A1Q5TYW2 823 aa16.5■□□□□ 0.23
VAMP1-205ENST00000535927 ANKRD20A3Q5VUR7 823 aa16.5■□□□□ 0.23
VAMP1-205ENST00000535927 FSTL4Q6MZW2 842 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms