RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 XRCC4Q13426 336 aa14.84□□□□□ -0.03
MSRB3-206ENST00000535664 DHX34Q14147 1143 aaKnown RBP14.84□□□□□ -0.03
MSRB3-206ENST00000535664 SPDYCQ5MJ68 293 aa14.84□□□□□ -0.03
MSRB3-206ENST00000535664 RABGAP1LQ5R372 815 aa14.84□□□□□ -0.03
MSRB3-206ENST00000535664 TEX35Q5T0J7 233 aa14.84□□□□□ -0.03
MSRB3-206ENST00000535664 EMC10Q5UCC4 262 aa14.84□□□□□ -0.03
MSRB3-206ENST00000535664 CHST9Q7L1S5 443 aa14.84□□□□□ -0.03
MSRB3-206ENST00000535664 UMODL1-AS1Q8N2C9 162 aa14.84□□□□□ -0.03
MSRB3-206ENST00000535664 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.84□□□□□ -0.03
MSRB3-206ENST00000535664 BHMTQ93088 406 aa14.84□□□□□ -0.03
MSRB3-206ENST00000535664 SPACA7Q96KW9 195 aa14.84□□□□□ -0.03
MSRB3-206ENST00000535664 RUNDC3BQ96NL0 473 aa14.84□□□□□ -0.03
MSRB3-206ENST00000535664 QKIQ96PU8 341 aaKnown RBP eCLIP14.84□□□□□ -0.03
MSRB3-206ENST00000535664 LRRC1Q9BTT6 524 aa14.84□□□□□ -0.03
MSRB3-206ENST00000535664 RETREG1Q9H6L5 497 aa14.84□□□□□ -0.03
MSRB3-206ENST00000535664 BCCIPQ9P287 314 aaKnown RBP eCLIP14.84□□□□□ -0.03
MSRB3-206ENST00000535664 THAP10Q9P2Z0 257 aaPredicted RBP14.84□□□□□ -0.03
MSRB3-206ENST00000535664 AMACRQ9UHK6 382 aa14.84□□□□□ -0.03
MSRB3-206ENST00000535664 NEU2Q9Y3R4 380 aa14.84□□□□□ -0.03
MSRB3-206ENST00000535664 PCDHGA5Q9Y5G8 931 aa14.84□□□□□ -0.03
MSRB3-206ENST00000535664 PRRT4C9JH25 899 aa14.83□□□□□ -0.04
MSRB3-206ENST00000535664 TSPAN3O60637 253 aa14.83□□□□□ -0.04
MSRB3-206ENST00000535664 ITGAVP06756 1048 aa14.83□□□□□ -0.04
MSRB3-206ENST00000535664 RBP3P10745 1247 aa14.83□□□□□ -0.04
MSRB3-206ENST00000535664 MAPKAPK2P49137 400 aa14.83□□□□□ -0.04
MSRB3-206ENST00000535664 CDH4P55283 916 aa14.83□□□□□ -0.04
MSRB3-206ENST00000535664 MRPS25P82663 173 aaKnown RBP14.83□□□□□ -0.04
MSRB3-206ENST00000535664 MESP2Q0VG99 397 aa14.83□□□□□ -0.04
MSRB3-206ENST00000535664 SLC12A1Q13621 1099 aa14.83□□□□□ -0.04
MSRB3-206ENST00000535664 PRKD1Q15139 912 aaPredicted RBP14.83□□□□□ -0.04
MSRB3-206ENST00000535664 ANO7Q6IWH7 933 aa14.83□□□□□ -0.04
MSRB3-206ENST00000535664 C8orf74Q6P047 294 aa14.83□□□□□ -0.04
MSRB3-206ENST00000535664 TFAP2DQ7Z6R9 452 aa14.83□□□□□ -0.04
MSRB3-206ENST00000535664 KIAA0907Q7Z7F0 614 aaPredicted RBP14.83□□□□□ -0.04
MSRB3-206ENST00000535664 CFAP52Q8N1V2 620 aa14.83□□□□□ -0.04
MSRB3-206ENST00000535664 LZTR1Q8N653 840 aa14.83□□□□□ -0.04
MSRB3-206ENST00000535664 FIBINQ8TAL6 211 aa14.83□□□□□ -0.04
MSRB3-206ENST00000535664 C10orf88Q9H8K7 445 aa14.83□□□□□ -0.04
MSRB3-206ENST00000535664 FBRSQ9HAH7 460 aa14.83□□□□□ -0.04
MSRB3-206ENST00000535664 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.83□□□□□ -0.04
MSRB3-206ENST00000535664 V9GYY5 206 aaPredicted RBP14.83□□□□□ -0.04
MSRB3-206ENST00000535664 A0A1B0GVM2 712 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 BCLAF3A2AJT9 711 aaKnown RBP14.82□□□□□ -0.04
MSRB3-206ENST00000535664 TCAF2A6NFQ2 919 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 HACD1B0YJ81 288 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 PRR5-ARHGAP8B1AHC4 643 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 TTI1O43156 1089 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 SYNCRIPO60506 623 aaKnown RBP14.82□□□□□ -0.04
MSRB3-206ENST00000535664 TBL1XO60907 577 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 ADAM23O75077 832 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 CLDN11O75508 207 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 CHRM1P11229 460 aaPredicted RBP14.82□□□□□ -0.04
MSRB3-206ENST00000535664 VAV1P15498 845 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 PXNP49023 591 aaPredicted RBP14.82□□□□□ -0.04
MSRB3-206ENST00000535664 NDST2P52849 883 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 TUBB4BP68371 445 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 ARHGAP8P85298 464 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 DR1Q01658 176 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 ENPP2Q13822 863 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 NAA30Q147X3 362 aaPredicted RBP14.82□□□□□ -0.04
MSRB3-206ENST00000535664 KCTD19Q17RG1 926 aaPredicted RBP14.82□□□□□ -0.04
MSRB3-206ENST00000535664 GEN1Q17RS7 908 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 ERCC6LQ2NKX8 1250 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 GLE1Q53GS7 698 aaKnown RBP14.82□□□□□ -0.04
MSRB3-206ENST00000535664 SLC45A4Q5BKX6 768 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 EGFLAMQ63HQ2 1017 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 CXorf57Q6NSI4 855 aaKnown RBP14.82□□□□□ -0.04
MSRB3-206ENST00000535664 TMEM92Q6UXU6 159 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 SLC36A4Q6YBV0 504 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 B4GALNT4Q76KP1 1039 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 BZW1Q7L1Q6 419 aaKnown RBP14.82□□□□□ -0.04
MSRB3-206ENST00000535664 ZC3H18Q86VM9 953 aaKnown RBP14.82□□□□□ -0.04
MSRB3-206ENST00000535664 JAMLQ86YT9 394 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 CDKL3Q8IVW4 592 aaPredicted RBP14.82□□□□□ -0.04
MSRB3-206ENST00000535664 MFN1Q8IWA4 741 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 PGBD3Q8N328 593 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 KDM1BQ8NB78 822 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 OR52K2Q8NGK3 314 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 ATL2Q8NHH9 583 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 HDAC11Q96DB2 347 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 RTP4Q96DX8 246 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 CELF6Q96J87 481 aaKnown RBP14.82□□□□□ -0.04
MSRB3-206ENST00000535664 CIPCQ9C0C6 399 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 SLC39A8Q9C0K1 460 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 ANKZF1Q9H8Y5 726 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 USP29Q9HBJ7 922 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 KIAA1522Q9P206 1035 aaPredicted RBP14.82□□□□□ -0.04
MSRB3-206ENST00000535664 DMGDHQ9UI17 866 aaKnown RBP14.82□□□□□ -0.04
MSRB3-206ENST00000535664 STON1Q9Y6Q2 735 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 ZFHX2Q9C0A1 2572 aaPredicted RBP14.82□□□□□ -0.04
MSRB3-206ENST00000535664 KIAA1549LQ6ZVL6 1849 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 NYNRINQ9P2P1 1898 aaKnown RBP14.82□□□□□ -0.04
MSRB3-206ENST00000535664 CHD5Q8TDI0 1954 aa14.82□□□□□ -0.04
MSRB3-206ENST00000535664 TCRBV21S2A2A0A5A6 115 aa14.81□□□□□ -0.04
MSRB3-206ENST00000535664 FAM187AA6NFU0 413 aa14.81□□□□□ -0.04
MSRB3-206ENST00000535664 TRIM24O15164 1050 aa14.81□□□□□ -0.04
MSRB3-206ENST00000535664 ECEL1O95672 775 aa14.81□□□□□ -0.04
MSRB3-206ENST00000535664 ASLP04424 464 aa14.81□□□□□ -0.04
MSRB3-206ENST00000535664 PABPC1P11940 636 aaKnown RBP14.81□□□□□ -0.04
MSRB3-206ENST00000535664 POLR2EP19388 210 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms