RNA–Protein interactions for RNA: ENST00000535477.5

CLPB-205, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-205ENST00000535477 ASB3Q9Y575 518 aa19.12■□□□□ 0.65
CLPB-205ENST00000535477 TRIM49D1C9J1S8 452 aa19.11■□□□□ 0.65
CLPB-205ENST00000535477 CCL16O15467 120 aa19.11■□□□□ 0.65
CLPB-205ENST00000535477 MYOGP15173 224 aa19.11■□□□□ 0.65
CLPB-205ENST00000535477 CCT5P48643 541 aa19.11■□□□□ 0.65
CLPB-205ENST00000535477 GNA12Q03113 381 aa19.11■□□□□ 0.65
CLPB-205ENST00000535477 TTC17Q96AE7 1141 aa19.11■□□□□ 0.65
CLPB-205ENST00000535477 MFSD3Q96ES6 412 aa19.11■□□□□ 0.65
CLPB-205ENST00000535477 CORO1BQ9BR76 489 aa19.11■□□□□ 0.65
CLPB-205ENST00000535477 IL22Q9GZX6 179 aa19.11■□□□□ 0.65
CLPB-205ENST00000535477 ACTL7AQ9Y615 435 aa19.11■□□□□ 0.65
CLPB-205ENST00000535477 CPQQ9Y646 472 aa19.11■□□□□ 0.65
CLPB-205ENST00000535477 C2orf71A6NGG8 1288 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 H3BNC9 293 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 PRPF4O43172 522 aaKnown RBP eCLIP19.1■□□□□ 0.65
CLPB-205ENST00000535477 KRT37O76014 449 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 GLUD1P00367 558 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 CD86P42081 329 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 DSC2Q02487 901 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 LBRQ14739 615 aaKnown RBP19.1■□□□□ 0.65
CLPB-205ENST00000535477 SPANXN3Q5MJ09 141 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 CYS1Q717R9 158 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 ELMOD1Q8N336 334 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 MRPL43Q8N983 215 aaKnown RBP19.1■□□□□ 0.65
CLPB-205ENST00000535477 ZNF473Q8WTR7 871 aaKnown RBP19.1■□□□□ 0.65
CLPB-205ENST00000535477 MRPS31Q92665 395 aaKnown RBP19.1■□□□□ 0.65
CLPB-205ENST00000535477 CDKL2Q92772 493 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 CHMP6Q96FZ7 201 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 MRGPRX2Q96LB1 330 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 SLC25A51Q9H1U9 297 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 ZNF180Q9UJW8 692 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 SMG5Q9UPR3 1016 aaKnown RBP19.1■□□□□ 0.65
CLPB-205ENST00000535477 ANAPC1Q9H1A4 1944 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.1■□□□□ 0.65
CLPB-205ENST00000535477 A0A1W2PRU2 124 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 TYROBPO43914 113 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 CLDN11O75508 207 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 FAM107AO95990 144 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 CKMP06732 381 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 SNRPAP09012 282 aaKnown RBP19.1■□□□□ 0.65
CLPB-205ENST00000535477 PYGBP11216 843 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 MYL4P12829 197 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 NIPAL4Q0D2K0 466 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 ZNF177Q13360 481 aaPredicted RBP19.1■□□□□ 0.65
CLPB-205ENST00000535477 POU6F1Q14863 301 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 LGSNQ5TDP6 509 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 MROH9Q5TGP6 573 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 RASSF3Q86WH2 238 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 TMC8Q8IU68 726 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 KLHDC8BQ8IXV7 354 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 PGBD5Q8N414 524 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 SLC25A41Q8N5S1 370 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.1■□□□□ 0.65
CLPB-205ENST00000535477 PHOSPHO2Q8TCD6 241 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 FATE1Q969F0 183 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 CERS2Q96G23 380 aa19.1■□□□□ 0.65
CLPB-205ENST00000535477 LINC01553A4QN01 128 aa19.09■□□□□ 0.65
CLPB-205ENST00000535477 SRRM3A6NNA2 597 aaPredicted RBP19.09■□□□□ 0.65
CLPB-205ENST00000535477 NRG2O14511 850 aaPredicted RBP19.09■□□□□ 0.65
CLPB-205ENST00000535477 PRAMEF11O60813 436 aa19.09■□□□□ 0.65
CLPB-205ENST00000535477 GJB3O75712 270 aa19.09■□□□□ 0.65
CLPB-205ENST00000535477 VIMP08670 466 aaKnown RBP19.09■□□□□ 0.65
CLPB-205ENST00000535477 GLDCP23378 1020 aa19.09■□□□□ 0.65
CLPB-205ENST00000535477 ADRA1AP35348 466 aa19.09■□□□□ 0.65
CLPB-205ENST00000535477 CHRNA4P43681 627 aa19.09■□□□□ 0.65
CLPB-205ENST00000535477 WNT3AP56704 352 aa19.09■□□□□ 0.65
CLPB-205ENST00000535477 WDR4P57081 412 aaKnown RBP19.09■□□□□ 0.65
CLPB-205ENST00000535477 ANKRD20A4Q4UJ75 823 aa19.09■□□□□ 0.65
CLPB-205ENST00000535477 STXBP5Q5T5C0 1151 aa19.09■□□□□ 0.65
CLPB-205ENST00000535477 DENND5AQ6IQ26 1287 aa19.09■□□□□ 0.65
CLPB-205ENST00000535477 CPLX4Q7Z7G2 160 aa19.09■□□□□ 0.65
CLPB-205ENST00000535477 TMEM135Q86UB9 458 aa19.09■□□□□ 0.65
CLPB-205ENST00000535477 SPPL3Q8TCT6 385 aa19.09■□□□□ 0.65
CLPB-205ENST00000535477 ADAMTS19Q8TE59 1207 aa19.09■□□□□ 0.65
CLPB-205ENST00000535477 BHMTQ93088 406 aa19.09■□□□□ 0.65
CLPB-205ENST00000535477 IMP4Q96G21 291 aaKnown RBP19.09■□□□□ 0.65
CLPB-205ENST00000535477 ZNF778Q96MU6 729 aa19.09■□□□□ 0.65
CLPB-205ENST00000535477 PPP1R2P1Q96PQ5 205 aa19.09■□□□□ 0.65
CLPB-205ENST00000535477 MAGEH1Q9H213 219 aa19.09■□□□□ 0.65
CLPB-205ENST00000535477 C12orf65Q9H3J6 166 aaKnown RBP19.09■□□□□ 0.65
CLPB-205ENST00000535477 HCFC1R1Q9NWW0 138 aa19.09■□□□□ 0.65
CLPB-205ENST00000535477 MAGEB16A2A368 324 aa19.08■□□□□ 0.65
CLPB-205ENST00000535477 AP3B1O00203 1094 aa19.08■□□□□ 0.65
CLPB-205ENST00000535477 USP1O94782 785 aa19.08■□□□□ 0.65
CLPB-205ENST00000535477 RHOCP08134 193 aa19.08■□□□□ 0.65
CLPB-205ENST00000535477 NMBRP28336 390 aa19.08■□□□□ 0.65
CLPB-205ENST00000535477 MPP3Q13368 585 aa19.08■□□□□ 0.65
CLPB-205ENST00000535477 QPCTQ16769 361 aa19.08■□□□□ 0.65
CLPB-205ENST00000535477 PPM1LQ5SGD2 360 aa19.08■□□□□ 0.65
CLPB-205ENST00000535477 TEX26Q8N6G2 289 aa19.08■□□□□ 0.65
CLPB-205ENST00000535477 SGSM3Q96HU1 749 aa19.08■□□□□ 0.65
CLPB-205ENST00000535477 ZNF317Q96PQ6 595 aaPredicted RBP19.08■□□□□ 0.65
CLPB-205ENST00000535477 DDX50Q9BQ39 737 aaKnown RBP19.08■□□□□ 0.65
CLPB-205ENST00000535477 LRRC3Q9BY71 257 aa19.08■□□□□ 0.65
CLPB-205ENST00000535477 TLR9Q9NR96 1032 aa19.08■□□□□ 0.65
CLPB-205ENST00000535477 ZFATQ9P243 1243 aa19.08■□□□□ 0.65
CLPB-205ENST00000535477 IRAK3Q9Y616 596 aa19.08■□□□□ 0.65
CLPB-205ENST00000535477 PSAT1Q9Y617 370 aa19.08■□□□□ 0.65
CLPB-205ENST00000535477 ZCWPW2A0A1B0GU75 182 aa19.08■□□□□ 0.64
CLPB-205ENST00000535477 FAM237BA0A1B0GVD1 139 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms