RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	CD109	Q6YHK3	1445 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	5	□□□□□ -1.61
ATM-223	ENST00000533979	FAM90A20P	A6NIJ5	464 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	KLK10	O43240	276 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	TLR2	O60603	784 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	ERAL1	O75616	437 aa	Known RBP	5	□□□□□ -1.61
ATM-223	ENST00000533979	TSPAN9	O75954	239 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	VIP	P01282	170 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	SRGAP2B	P0DMP2	458 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	AR	P10275	920 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	HOXD9	P28356	352 aa	Predicted RBP	5	□□□□□ -1.61
ATM-223	ENST00000533979	ACSL1	P33121	698 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	RGS2	P41220	211 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	DGKQ	P52824	942 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	TXNL4A	P83876	142 aa	Known RBP	5	□□□□□ -1.61
ATM-223	ENST00000533979	CCDC15	Q0P6D6	951 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	ATP1A4	Q13733	1029 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	KCNJ12	Q14500	433 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	GRM4	Q14833	912 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	RPS6KA2	Q15349	733 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	SEC23B	Q15437	767 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	GALNTL6	Q49A17	601 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	DUSP28	Q4G0W2	176 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	AWAT1	Q58HT5	328 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	EARS2	Q5JPH6	523 aa	Known RBP	5	□□□□□ -1.61
ATM-223	ENST00000533979	FSTL5	Q8N475	847 aa	Predicted RBP	5	□□□□□ -1.61
ATM-223	ENST00000533979	P2RY11	Q96G91	374 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	CALML4	Q96GE6	196 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	FEM1C	Q96JP0	617 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	SPATA17	Q96L03	361 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	BRD8	Q9H0E9	1235 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	ABCF3	Q9NUQ8	709 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	TRNAU1AP	Q9NX07	287 aa	Known RBP	5	□□□□□ -1.61
ATM-223	ENST00000533979	TMOD4	Q9NZQ9	345 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	KCND3	Q9UK17	655 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	CNTN6	Q9UQ52	1028 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	CAMK2A	Q9UQM7	478 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	CACNA1I	Q9P0X4	2223 aa		5	□□□□□ -1.61
ATM-223	ENST00000533979	SRCAP	Q6ZRS2	3230 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	ERICH3	Q5RHP9	1530 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	KIAA0586	Q9BVV6	1533 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	TRIM64	A6NGJ6	449 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	TRIM64B	A6NI03	449 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	SAC3D1	A6NKF1	404 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	EFCAB8	A8MWE9	144 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979		J3KTA2	159 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	SOCS2	O14508	198 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	DHH	O43323	396 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	KCNAB3	O43448	404 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	BAG2	O95816	211 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	CD63	P08962	238 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.99	□□□□□ -1.61
ATM-223	ENST00000533979	CTSA	P10619	480 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	ITGB6	P18564	788 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	EPHA8	P29322	1005 aa	Predicted RBP	4.99	□□□□□ -1.61
ATM-223	ENST00000533979	TM4SF1	P30408	202 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	HTR7	P34969	479 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	GGT5	P36269	586 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	NNMT	P40261	264 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	PAFAH1B1	P43034	410 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	CDK7	P50613	346 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	RBM5	P52756	815 aa	Known RBP eCLIP	4.99	□□□□□ -1.61
ATM-223	ENST00000533979	SNX16	P57768	344 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	RPP30	P78346	268 aa	Known RBP	4.99	□□□□□ -1.61
ATM-223	ENST00000533979	WASHC5	Q12768	1159 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	SLC14A1	Q13336	389 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	DCTN1	Q14203	1278 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	RBMS2	Q15434	407 aa	Known RBP	4.99	□□□□□ -1.61
ATM-223	ENST00000533979	FAM69A	Q5T7M9	428 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	AWAT2	Q6E213	333 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	GRHL2	Q6ISB3	625 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	NAA16	Q6N069	864 aa	Predicted RBP	4.99	□□□□□ -1.61
ATM-223	ENST00000533979	INO80C	Q6PI98	192 aa	Predicted RBP	4.99	□□□□□ -1.61
ATM-223	ENST00000533979	ATF7IP	Q6VMQ6	1270 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	TTC39C	Q8N584	583 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	SRBD1	Q8N5C6	995 aa	Known RBP	4.99	□□□□□ -1.61
ATM-223	ENST00000533979	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	4.99	□□□□□ -1.61
ATM-223	ENST00000533979	NFKBID	Q8NI38	313 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	USP6NL	Q92738	828 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	GRAMD1A	Q96CP6	724 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	JAKMIP1	Q96N16	626 aa	Known RBP	4.99	□□□□□ -1.61
ATM-223	ENST00000533979	ADGRE3	Q9BY15	652 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	SIL1	Q9H173	461 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	OR10A4	Q9H209	315 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	SLC25A32	Q9H2D1	315 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	MUC13	Q9H3R2	512 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	WDR26	Q9H7D7	661 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	DBNDD1	Q9H9R9	158 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	ERVK-5	Q9HDB9	667 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	CCDC177	Q9NQR7	707 aa	Predicted RBP	4.99	□□□□□ -1.61
ATM-223	ENST00000533979	FSCN3	Q9NQT6	498 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	DIAPH3	Q9NSV4	1193 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	TAS2R10	Q9NYW0	307 aa		4.99	□□□□□ -1.61
ATM-223	ENST00000533979	ZNF215	Q9UL58	517 aa	Predicted RBP	4.99	□□□□□ -1.61
ATM-223	ENST00000533979	SETD1A	O15047	1707 aa	Known RBP	4.99	□□□□□ -1.61
ATM-223	ENST00000533979	NUP160	Q12769	1436 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	EPRS	P07814	1512 aa	Known RBP	4.98	□□□□□ -1.61
ATM-223	ENST00000533979	BCORL1	Q5H9F3	1711 aa		4.98	□□□□□ -1.61
ATM-223	ENST00000533979	GTPBP10	A4D1E9	387 aa	Known RBP	4.98	□□□□□ -1.61
ATM-223	ENST00000533979	UBE2C	O00762	179 aa		4.98	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms