RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 CHRNA3P32297 505 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 ACSL1P33121 698 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 CYLC1P35663 651 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-227ENST00000533909 NDST2P52849 883 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 ATXN3P54252 364 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-227ENST00000533909 ARF5P84085 180 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 DUOXA1Q1HG43 343 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 POM121L1PQ3SYA9 428 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 ARTNQ5T4W7 220 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 DCAF12L1Q5VU92 463 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-227ENST00000533909 LEKR1Q6ZMV7 388 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 UMODL1-AS1Q8N2C9 162 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 OR14C36Q8NHC7 312 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 PIP4K2CQ8TBX8 421 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 NETO1Q8TDF5 533 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 TEKT4Q8WW24 435 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 PPP1R16AQ96I34 528 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 PILRBQ9UKJ0 227 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 NENFQ9UMX5 172 aa13.65□□□□□ -0.22
CAPN1-227ENST00000533909 FCF1Q9Y324 198 aaKnown RBP13.65□□□□□ -0.22
CAPN1-227ENST00000533909 TBC1D3DA0A087WVF3 549 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 TBC1D3IA0A087WXS9 549 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 TBC1D3EA0A087X179 549 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 TBC1D3KA0A087X1G2 549 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 TBC1D3FA6NER0 549 aaPredicted RBP13.64□□□□□ -0.23
CAPN1-227ENST00000533909 METTL12A8MUP2 240 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 TBC1D3LB9A6J9 549 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 DFFAO00273 331 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 PROSCO94903 275 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 TBC1D3HP0C7X1 549 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 RARAP10276 462 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 ERCC2P18074 760 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 MAOBP27338 520 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 IL1R2P27930 398 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 ID4P47928 161 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 HCAR3P49019 387 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 SNRPD1P62314 119 aaKnown RBP13.64□□□□□ -0.23
CAPN1-227ENST00000533909 MESDQ14696 234 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 DPYSL2Q16555 572 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 RSPO4Q2I0M5 234 aaPredicted RBP13.64□□□□□ -0.23
CAPN1-227ENST00000533909 ODF2Q5BJF6 829 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 CARD16Q5EG05 197 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 TBC1D3GQ6DHY5 549 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 TBC1D3CQ6IPX1 549 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 RHOT2Q8IXI1 618 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 TBC1D3Q8IZP1 549 aaPredicted RBP13.64□□□□□ -0.23
CAPN1-227ENST00000533909 ZCCHC9Q8N567 271 aaKnown RBP13.64□□□□□ -0.23
CAPN1-227ENST00000533909 AADATQ8N5Z0 425 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 TC2NQ8N9U0 490 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 KCTD6Q8NC69 237 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 OR2A12Q8NGT7 310 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 SLC35G2Q8TBE7 412 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 CASKIN2Q8WXE0 1202 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 HMCESQ96FZ2 354 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 CELF6Q96J87 481 aaKnown RBP13.64□□□□□ -0.23
CAPN1-227ENST00000533909 PANX2Q96RD6 677 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 EDEM2Q9BV94 578 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 TM6SF2Q9BZW4 377 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 NEUROG2Q9H2A3 272 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 C6orf106Q9H6K1 298 aaPredicted RBP13.64□□□□□ -0.23
CAPN1-227ENST00000533909 ZDHHC6Q9H6R6 413 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 SP110Q9HB58 689 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 TMEM74BQ9NUR3 256 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 CWC15Q9P013 229 aaKnown RBP13.64□□□□□ -0.23
CAPN1-227ENST00000533909 IL36AQ9UHA7 158 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 PPM1HQ9ULR3 514 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 SLC6A14Q9UN76 642 aa13.64□□□□□ -0.23
CAPN1-227ENST00000533909 NUP205Q92621 2012 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 PATE3B3GLJ2 98 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 SLC7A4O43246 635 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 KRT7P08729 469 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 C7P10643 843 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 TCF4P15884 667 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 MAGEA1P43355 309 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 NOP2P46087 812 aaKnown RBP13.63□□□□□ -0.23
CAPN1-227ENST00000533909 CCNHP51946 323 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-227ENST00000533909 CDH6P55285 790 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 RHOAP61586 193 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 RAD51Q06609 339 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 SERINC3Q13530 473 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 ARSIQ5FYB1 569 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 NCEH1Q6PIU2 408 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 TMCO3Q6UWJ1 677 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 DPY19L3Q6ZPD9 716 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 MAP7D3Q8IWC1 876 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 CCDC170Q8IYT3 715 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 LZTR1Q8N653 840 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 TMIEQ8NEW7 156 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 OR2T34Q8NGX1 318 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 RFFLQ8WZ73 363 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 ISG20Q96AZ6 181 aaKnown RBP13.63□□□□□ -0.23
CAPN1-227ENST00000533909 GDAP1L1Q96MZ0 367 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 HEPHQ9BQS7 1158 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 GTPBP2Q9BX10 602 aaKnown RBP13.63□□□□□ -0.23
CAPN1-227ENST00000533909 CALN1Q9BXU9 219 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 HECAQ9UBI9 543 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-227ENST00000533909 UBA2Q9UBT2 640 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-227ENST00000533909 SERGEFQ9UGK8 458 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 EVLQ9UI08 416 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms