RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 SNF8Q96H20 258 aa13.69□□□□□ -0.22
TRAPPC4-214ENST00000533632 SLC2A11Q9BYW1 496 aa13.69□□□□□ -0.22
TRAPPC4-214ENST00000533632 TRIM31Q9BZY9 425 aa13.69□□□□□ -0.22
TRAPPC4-214ENST00000533632 FOXQ1Q9C009 403 aa13.69□□□□□ -0.22
TRAPPC4-214ENST00000533632 MUC3BQ9H195 1237 aa13.69□□□□□ -0.22
TRAPPC4-214ENST00000533632 MAGEH1Q9H213 219 aa13.69□□□□□ -0.22
TRAPPC4-214ENST00000533632 TBC1D17Q9HA65 648 aa13.69□□□□□ -0.22
TRAPPC4-214ENST00000533632 ZDHHC18Q9NUE0 388 aa13.69□□□□□ -0.22
TRAPPC4-214ENST00000533632 GRHL1Q9NZI5 618 aa13.69□□□□□ -0.22
TRAPPC4-214ENST00000533632 KIAA1522Q9P206 1035 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC4-214ENST00000533632 ASIC3Q9UHC3 531 aa13.69□□□□□ -0.22
TRAPPC4-214ENST00000533632 GGA2Q9UJY4 613 aa13.69□□□□□ -0.22
TRAPPC4-214ENST00000533632 SNX24Q9Y343 169 aa13.69□□□□□ -0.22
TRAPPC4-214ENST00000533632 MCF2LO15068 1137 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 GPR37L1O60883 481 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 PEX11BO96011 259 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 RBP3P10745 1247 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 GLULP15104 373 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 TARSP26639 723 aaKnown RBP13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 STIP1P31948 543 aaKnown RBP13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 HSPA9P38646 679 aaKnown RBP13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 ARF5P84085 180 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 PPIDQ08752 370 aaKnown RBP13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 NR1H3Q13133 447 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 PITRM1Q5JRX3 1037 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 LEKR1Q6ZMV7 388 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 RALGPS2Q86X27 583 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 ATPAF2Q8N5M1 289 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 EZH1Q92800 747 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 ART4Q93070 314 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 HDAC11Q96DB2 347 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 QKIQ96PU8 341 aaKnown RBP eCLIP13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 XPO6Q96QU8 1125 aaKnown RBP13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 SPON2Q9BUD6 331 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 C8orf33Q9H7E9 229 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 PDFQ9HBH1 243 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 ATP13A1Q9HD20 1204 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 DONSONQ9NYP3 566 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 VPS51Q9UID3 782 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 VPS28Q9UK41 221 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 HPCAL4Q9UM19 191 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 SLC27A6Q9Y2P4 619 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 RAD54BQ9Y620 910 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 MYO18AQ92614 2054 aaKnown RBP13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 KANSL1LA0AUZ9 987 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 ARHGAP42A6NI28 874 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 PRRT4C9JH25 899 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 PI15O43692 258 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 ZNF189O75820 626 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 CD160O95971 181 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 FAM153BP0C7A2 387 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 CTSOP43234 321 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 PLK1P53350 603 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 GDF10P55107 478 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 PDK1Q15118 436 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 FAM153CQ494X1 144 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 IL31Q6EBC2 164 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 LINGO4Q6UY18 593 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 CEP128Q6ZU80 1094 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 BZW1Q7L1Q6 419 aaKnown RBP13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 SORCS1Q8WY21 1168 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 TMEM121Q9BTD3 319 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 FOXP3Q9BZS1 431 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 LTB4R2Q9NPC1 389 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 DEC1Q9P2X7 70 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 FAM153AQ9UHL3 310 aa13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 IPO11Q9UI26 975 aaKnown RBP13.68□□□□□ -0.22
TRAPPC4-214ENST00000533632 CFAP69A5D8W1 941 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 H7C0C1 242 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 CBX4O00257 560 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 KDELR3O43731 214 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 PRAMEF11O60813 436 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 KRT14P02533 472 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 MX2P20592 715 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 RBL1P28749 1068 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 ADCY8P40145 1251 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 ATP5OP48047 213 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 PLTPP55058 493 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 AP1B1Q10567 949 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 XRCC4Q13426 336 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 SLC45A4Q5BKX6 768 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 GRAMD4Q6IC98 578 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 ZDHHC24Q6UX98 284 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 PRUNE1Q86TP1 453 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 CCDC117Q8IWD4 279 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 DCAF4L2Q8NA75 395 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 GLIS1Q8NBF1 620 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 CCNYQ8ND76 341 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 TFB1MQ8WVM0 346 aaKnown RBP13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 PBXIP1Q96AQ6 731 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 TSGA13Q96PP4 275 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 USP29Q9HBJ7 922 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 PCDH9Q9HC56 1237 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 MED4Q9NPJ6 270 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 DLGAP2Q9P1A6 1054 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 HCN2Q9UL51 889 aa13.67□□□□□ -0.22
TRAPPC4-214ENST00000533632 GOLGA6BA6NDN3 693 aa13.66□□□□□ -0.22
TRAPPC4-214ENST00000533632 KCNK1O00180 336 aa13.66□□□□□ -0.22
TRAPPC4-214ENST00000533632 PPP1R12AO14974 1030 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC4-214ENST00000533632 NCAM2O15394 837 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms