RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 ACOT1Q86TX2 421 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 CNTD1Q8N815 330 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 CALML4Q96GE6 196 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 C8orf76Q96K31 380 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 SLC25A18Q9H1K4 315 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 SEC63Q9UGP8 760 aaKnown RBP1.77□□□□□ -2.13
KNL1-211ENST00000533001 BLACEA4D250 179 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 PRICKLE3O43900 615 aaPredicted RBP1.77□□□□□ -2.13
KNL1-211ENST00000533001 PRAMEF10O60809 474 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 PRPF6O94906 941 aaKnown RBP1.77□□□□□ -2.13
KNL1-211ENST00000533001 PDGFRBP09619 1106 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 TCF4P15884 667 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 SYT1P21579 422 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 MFAP1P55081 439 aaKnown RBP1.77□□□□□ -2.13
KNL1-211ENST00000533001 GUCY1B3Q02153 619 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 HNRNPDQ14103 355 aaKnown RBP1.77□□□□□ -2.13
KNL1-211ENST00000533001 CST6Q15828 149 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 USP39Q53GS9 565 aaKnown RBP1.77□□□□□ -2.13
KNL1-211ENST00000533001 PITRM1Q5JRX3 1037 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 DAB2IPQ5VWQ8 1189 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 TXNRD3NBQ6F5E7 133 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 ZFAND4Q86XD8 727 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 TMTC1Q8IUR5 882 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 CKAP2LQ8IYA6 745 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 TSTD1Q8NFU3 115 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 ERLEC1Q96DZ1 483 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 VCPIP1Q96JH7 1222 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 RPL10LQ96L21 214 aaKnown RBP1.77□□□□□ -2.13
KNL1-211ENST00000533001 FAM213AQ9BRX8 229 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 PLAC1Q9HBJ0 212 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 MED16Q9Y2X0 877 aa1.77□□□□□ -2.13
KNL1-211ENST00000533001 CTAGE15A4D2H0 777 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 TMEM200CA6NKL6 621 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 HNRNPDLO14979 420 aaKnown RBP1.76□□□□□ -2.13
KNL1-211ENST00000533001 AP5Z1O43299 807 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 ADCY5O95622 1261 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 UMODP07911 640 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 PDHA1P08559 390 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 TSHRP16473 764 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 HOXC12P31275 282 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 MCM7P33993 719 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 UGT1A5P35504 534 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 HDAC4P56524 1084 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 GSCP56915 257 aaPredicted RBP1.76□□□□□ -2.13
KNL1-211ENST00000533001 ADORA2A-AS1P86434 159 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 DCAF6Q58WW2 860 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 CYP4A22Q5TCH4 519 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 CPZQ66K79 652 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 KIAA0895LQ68EN5 471 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 TCTN3Q6NUS6 607 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 MRPL14Q6P1L8 145 aaKnown RBP1.76□□□□□ -2.13
KNL1-211ENST00000533001 Q6ZS92 163 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 ARCQ7LC44 396 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 CTAGE6Q86UF2 777 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 CIR1Q86X95 450 aaPredicted RBP1.76□□□□□ -2.13
KNL1-211ENST00000533001 CCDC148Q8NFR7 591 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 BICD2Q8TD16 824 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 TMC2Q8TDI7 906 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 STK32AQ8WU08 396 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 PPM1MQ96MI6 270 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 PEBP4Q96S96 227 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 TRIM7Q9C029 511 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 LIME1Q9H400 295 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 HS3ST4Q9Y661 456 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 TRAPPC3O43617 180 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 USP17L7P0C7H9 530 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 MARCKSP29966 332 aaPredicted RBP1.76□□□□□ -2.13
KNL1-211ENST00000533001 CORO1AP31146 461 aaKnown RBP1.76□□□□□ -2.13
KNL1-211ENST00000533001 SLC5A2P31639 672 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 GABRB2P47870 512 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 PRR20EP86478 221 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 PRR20CP86479 221 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 PRR20DP86480 221 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 PRR20BP86481 221 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 PRR20AP86496 221 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 ABRQ12979 859 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 SKIDA1Q1XH10 827 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 ARHGAP40Q5TG30 622 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 CERS6Q6ZMG9 384 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 UNC93AQ86WB7 457 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 DHX40Q8IX18 779 aaKnown RBP1.76□□□□□ -2.13
KNL1-211ENST00000533001 ANKRD52Q8NB46 1076 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 ZSCAN1Q8NBB4 408 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 ZNF248Q8NDW4 579 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 OR2T34Q8NGX1 318 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 TMX3Q96JJ7 454 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 SLC41A2Q96JW4 573 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 SMAD5Q99717 465 aaKnown RBP1.76□□□□□ -2.13
KNL1-211ENST00000533001 TTYH3Q9C0H2 523 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 AICDAQ9GZX7 198 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 RWDD1Q9H446 243 aaPredicted RBP1.76□□□□□ -2.13
KNL1-211ENST00000533001 PARVGQ9HBI0 331 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 PREBQ9HCU5 417 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 ABCB8Q9NUT2 735 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 OCIAD1Q9NX40 245 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 RBAKQ9NYW8 714 aaPredicted RBP1.76□□□□□ -2.13
KNL1-211ENST00000533001 DEC1Q9P2X7 70 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 CLCA2Q9UQC9 943 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 PLEKHM1Q9Y4G2 1056 aa1.76□□□□□ -2.13
KNL1-211ENST00000533001 B3GALT1Q9Y5Z6 326 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms