RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 INTS6LQ5JSJ4 861 aaKnown RBP9.54□□□□□ -0.88
BDNF-216ENST00000532997 ISLR2Q6UXK2 745 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 EFL1Q7Z2Z2 1120 aaKnown RBP9.54□□□□□ -0.88
BDNF-216ENST00000532997 SAMD7Q7Z3H4 446 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 AMIGO2Q86SJ2 522 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 KLHL23Q8NBE8 558 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 RNF169Q8NCN4 708 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 USP33Q8TEY7 942 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 GIPC2Q8TF65 315 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 KCTD4Q8WVF5 259 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.54□□□□□ -0.88
BDNF-216ENST00000532997 PRICKLE1Q96MT3 831 aaPredicted RBP9.54□□□□□ -0.88
BDNF-216ENST00000532997 B3GNT5Q9BYG0 378 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 POMKQ9H5K3 350 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 VPS28Q9UK41 221 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 CNOT11Q9UKZ1 510 aaKnown RBP9.54□□□□□ -0.88
BDNF-216ENST00000532997 LRPAP1P30533 357 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 ABCG1P45844 678 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 IREB2P48200 963 aaKnown RBP9.54□□□□□ -0.88
BDNF-216ENST00000532997 FOXB2Q5VYV0 432 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 METTL23Q86XA0 190 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 SULF1Q8IWU6 871 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 NUP93Q8N1F7 819 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 SLC2A14Q8TDB8 520 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 ASB9Q96DX5 294 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 ASB2Q96Q27 587 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 PDZD7Q9H5P4 517 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 CAB39LQ9H9S4 337 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 PREBQ9HCU5 417 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 SUCOQ9UBS9 1254 aaKnown RBP9.54□□□□□ -0.88
BDNF-216ENST00000532997 BLOC1S6Q9UL45 172 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 SNX5Q9Y5X3 404 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 NUMBLQ9Y6R0 609 aa9.54□□□□□ -0.88
BDNF-216ENST00000532997 ONECUT3O60422 494 aaPredicted RBP9.53□□□□□ -0.88
BDNF-216ENST00000532997 VTNP04004 478 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 MAGEA3P43357 314 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 AMHR2Q16671 573 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 FAM187BQ17R55 369 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 SLC10A6Q3KNW5 377 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 DDIASQ8IXT1 998 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 RYBPQ8N488 228 aaPredicted RBP9.53□□□□□ -0.88
BDNF-216ENST00000532997 EXT2Q93063 718 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 WNK4Q96J92 1243 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 NPAS2Q99743 824 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 MRPL45Q9BRJ2 306 aaKnown RBP9.53□□□□□ -0.88
BDNF-216ENST00000532997 WDCPQ9H6R7 721 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 CATSPERBQ9H7T0 1116 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 CHST12Q9NRB3 414 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 ZNF358Q9NW07 568 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 CCDC167Q9P0B6 97 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 SLC17A6Q9P2U8 582 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 FZD10Q9ULW2 581 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 ORC6Q9Y5N6 252 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 OR6B1O95007 311 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 ALBP02768 609 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 PYGLP06737 847 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 NCAM1P13591 858 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 TPH1P17752 444 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 ERCC2P18074 760 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 ARF4P18085 180 aaPredicted RBP9.53□□□□□ -0.88
BDNF-216ENST00000532997 TUBA4AP68366 448 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 BNIP2Q12982 314 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 CSHL1Q14406 222 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 HERC6Q8IVU3 1022 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 CCDC185Q8N715 623 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 PHC3Q8NDX5 983 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 OR6P1Q8NGX9 317 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 NFKBIZQ9BYH8 718 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 NDUFAF1Q9Y375 327 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 MTF2Q9Y483 593 aaPredicted RBP9.53□□□□□ -0.88
BDNF-216ENST00000532997 PPP2R3BQ9Y5P8 575 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 LY75O60449 1722 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 SAC3D1A6NKF1 404 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 BBIP1A8MTZ0 92 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 CLOCKO15516 846 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 SUPT7LO94864 414 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 DPEP1P16444 411 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 NFKB1P19838 968 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 SNAPC2Q13487 334 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 MAP1SQ66K74 1059 aaPredicted RBP9.53□□□□□ -0.88
BDNF-216ENST00000532997 SLC27A1Q6PCB7 646 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 BORAQ6PGQ7 559 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 CYP2R1Q6VVX0 501 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 SLC41A1Q8IVJ1 513 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 MARK4Q96L34 752 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 SORT1Q99523 831 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 TRMOQ9BU70 441 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 GBA3Q9H227 469 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 WARS2Q9UGM6 360 aaKnown RBP9.53□□□□□ -0.88
BDNF-216ENST00000532997 PSAT1Q9Y617 370 aa9.53□□□□□ -0.88
BDNF-216ENST00000532997 TYW5A2RUC4 315 aaKnown RBP9.52□□□□□ -0.88
BDNF-216ENST00000532997 RRN3P2A6NIE6 340 aa9.52□□□□□ -0.88
BDNF-216ENST00000532997 M0QZ92 97 aa9.52□□□□□ -0.88
BDNF-216ENST00000532997 LGR5O75473 907 aa9.52□□□□□ -0.88
BDNF-216ENST00000532997 CSPG5O95196 566 aa9.52□□□□□ -0.88
BDNF-216ENST00000532997 ZNF23P17027 643 aa9.52□□□□□ -0.88
BDNF-216ENST00000532997 SLC7A1P30825 629 aa9.52□□□□□ -0.88
BDNF-216ENST00000532997 MSX2P35548 267 aaPredicted RBP9.52□□□□□ -0.88
BDNF-216ENST00000532997 CASP2P42575 452 aa9.52□□□□□ -0.88
BDNF-216ENST00000532997 GALK1P51570 392 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms