RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 DENRO43583 198 aaKnown RBP6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 WDR47O94967 919 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 CXCL8P10145 99 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 PSMA4P25789 261 aaKnown RBP6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 HNRNPFP52597 415 aaKnown RBP6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 CDH15P55291 814 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 BNC1Q01954 994 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 TGFBIQ15582 683 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 DCAF6Q58WW2 860 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 MROH9Q5TGP6 573 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 TAPT1Q6NXT6 567 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 UGT2A3Q6UWM9 527 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 SLCO6A1Q86UG4 719 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 ITIH5Q86UX2 942 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 TDRPQ86YL5 185 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 GATAD2AQ86YP4 633 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 C4orf19Q8IY42 314 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 RCOR2Q8IZ40 523 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 XXYLT1Q8NBI6 393 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 OR6B3Q8NGW1 331 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 BSNDQ8WZ55 320 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 PROX1Q92786 737 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 VPS33AQ96AX1 596 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 C11orf70Q9BRQ4 267 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 HGH1Q9BTY7 390 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 CALN1Q9BXU9 219 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 DGCR6LQ9BY27 220 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 MRPL9Q9BYD2 267 aaKnown RBP6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 TXLNGYQ9BZA5 131 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 MCOLN1Q9GZU1 580 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 EPS8L2Q9H6S3 715 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 WDR6Q9NNW5 1121 aaKnown RBP6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 INIPQ9NRY2 104 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 VPS4AQ9UN37 437 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 BRCA2P51587 3418 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 TSPAN4O14817 238 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 SRP72O76094 671 aaKnown RBP6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 B3GAT3O94766 335 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 GLRA2P23416 452 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 FASP25445 335 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 CCT3P49368 545 aaKnown RBP6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 SLC12A2P55011 1212 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 FAAP100Q0VG06 881 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 POLD3Q15054 466 aaPredicted RBP6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 ARMC4Q5T2S8 1044 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 COL13A1Q5TAT6 717 aaPredicted RBP6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 EEF1DP3Q658K8 133 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 ZCCHC23Q6ZST2 131 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 SYTL1Q8IYJ3 562 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 BPIFB6Q8NFQ5 453 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 MED30Q96HR3 178 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 YME1L1Q96TA2 773 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 GAD1Q99259 594 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 C9orf16Q9BUW7 83 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 CDHR5Q9HBB8 845 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 NEK6Q9HC98 313 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 LRRC4CQ9HCJ2 640 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 SACM1LQ9NTJ5 587 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 HSPBP1Q9NZL4 362 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 HESX1Q9UBX0 185 aa6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 MRPL42Q9Y6G3 142 aaKnown RBP6.89□□□□□ -1.31
TGFBR3-209ENST00000532540 DHX15O43143 795 aaKnown RBP6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 AQP9O43315 295 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 DNAJA2O60884 412 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 NOS1APO75052 506 aaPredicted RBP6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 NOL4O94818 638 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 GZMAP12544 262 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 ITGAXP20702 1163 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 MZF1P28698 734 aaPredicted RBP6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 RPL10AP62906 217 aaKnown RBP6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 FOXD4Q12950 439 aaPredicted RBP6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 MXD4Q14582 209 aaPredicted RBP6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 TYSND1Q2T9J0 566 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 TBCELQ5QJ74 424 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 GDF6Q6KF10 455 aaPredicted RBP6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 CGB2Q6NT52 195 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 TAF2Q6P1X5 1199 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 TDRD5Q8NAT2 981 aaKnown RBP6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 TRPV1Q8NER1 839 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 ZFP42Q96MM3 310 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 STN1Q9H668 368 aaKnown RBP6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 SSU72Q9NP77 194 aaKnown RBP6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 TCF7L2Q9NQB0 619 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 KLHL11Q9NVR0 708 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 HSFX1Q9UBD0 423 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 ADAMTS6Q9UKP5 1117 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 TTLL3Q9Y4R7 772 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 SNX9Q9Y5X1 595 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 SMCHD1A6NHR9 2005 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 HEATR9A2RTY3 570 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 RRN3P2A6NIE6 340 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 TRIM24O15164 1050 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 CALCAP01258 141 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 TFE3P19532 575 aaPredicted RBP6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 HOXD13P35453 343 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 SLC1A6P48664 564 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 HERC3Q15034 1050 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 FASTKD1Q53R41 847 aaKnown RBP6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 SDE2Q6IQ49 451 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms