RNA–Protein interactions for RNA: ENST00000532014.1

TRIM53AP-201, Transcript of tripartite motif containing 53A, pseudogene, humanhuman

BASIC

Gene TRIM53AP, Length 1,544 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53AP-201ENST00000532014 PTPRN2Q92932 1015 aa9.46□□□□□ -0.9
TRIM53AP-201ENST00000532014 TSGA13Q96PP4 275 aa9.46□□□□□ -0.9
TRIM53AP-201ENST00000532014 GABRG3Q99928 467 aa9.46□□□□□ -0.9
TRIM53AP-201ENST00000532014 CHRDQ9H2X0 955 aa9.46□□□□□ -0.9
TRIM53AP-201ENST00000532014 PRDM16Q9HAZ2 1276 aa9.46□□□□□ -0.9
TRIM53AP-201ENST00000532014 DONSONQ9NYP3 566 aa9.46□□□□□ -0.9
TRIM53AP-201ENST00000532014 FCF1Q9Y324 198 aaKnown RBP9.46□□□□□ -0.9
TRIM53AP-201ENST00000532014 RAD54BQ9Y620 910 aa9.46□□□□□ -0.9
TRIM53AP-201ENST00000532014 STON1Q9Y6Q2 735 aa9.46□□□□□ -0.9
TRIM53AP-201ENST00000532014 DMXL1Q9Y485 3027 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 CXorf51AA0A1B0GTR3 108 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 CHURC1-FNTBB4DL54 471 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 KCNK1O00180 336 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 TMCC1O94876 653 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 ASLP04424 464 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 ATP5BP06576 529 aaKnown RBP9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 MSNP26038 577 aaKnown RBP9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 ETFBP38117 255 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 MRPS21P82921 87 aaKnown RBP9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 WASHC5Q12768 1159 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 ZBTB17Q13105 803 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 MTAPQ13126 283 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 OASLQ15646 514 aaKnown RBP9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 DLG2Q15700 870 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 HNRNPA1L2Q32P51 320 aaKnown RBP9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 C9orf64Q5T6V5 341 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 BMP8AQ7Z5Y6 402 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 CHPFQ8IZ52 775 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 SYNPOQ8N3V7 929 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 TEX26Q8N6G2 289 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 CNTD1Q8N815 330 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 PRELID2Q8N945 189 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 KDM1BQ8NB78 822 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 TSEN2Q8NCE0 465 aaKnown RBP9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 SLC35B2Q8TB61 432 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 ACTRT1Q8TDG2 376 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 KCNV2Q8TDN2 545 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 PBKQ96KB5 322 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 QKIQ96PU8 341 aaKnown RBP eCLIP9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 NELL2Q99435 816 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 CEP41Q9BYV8 373 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 LHX3Q9UBR4 397 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 DNPEPQ9ULA0 475 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 MRPS17Q9Y2R5 130 aaKnown RBP9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 SAR1BQ9Y6B6 198 aa9.45□□□□□ -0.9
TRIM53AP-201ENST00000532014 TTC24A2A3L6 582 aaPredicted RBP9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 STK25O00506 426 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 MATN3O15232 486 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 SIN3BO75182 1162 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 KLF8O95600 359 aaPredicted RBP9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 CTSLP07711 333 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 TCP1P17987 556 aaKnown RBP9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 CCNCP24863 283 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 RBL1P28749 1068 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 NTSR1P30989 418 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 CLCN5P51795 746 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 METAP1P53582 386 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 COPAP53621 1224 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 GDF10P55107 478 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 LRRC32Q14392 662 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 PDK1Q15118 436 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 FNDC3BQ53EP0 1204 aaKnown RBP9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 INO80DQ53TQ3 878 aaPredicted RBP9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 RETSATQ6NUM9 610 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 C22orf39Q6P5X5 142 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 SERPINA13PQ6UXR4 307 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 Q6ZVU0 165 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 ZNF354CQ86Y25 554 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 MAML2Q8IZL2 1156 aaPredicted RBP9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 ATP11CQ8NB49 1132 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 OR2A12Q8NGT7 310 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 C1orf54Q8WWF1 131 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 FATE1Q969F0 183 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 PBXIP1Q96AQ6 731 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 EXOC2Q96KP1 924 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 MKRN2Q9H000 416 aaKnown RBP9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 TNKS2Q9H2K2 1166 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 MFSD1Q9H3U5 465 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 SP110Q9HB58 689 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 USP29Q9HBJ7 922 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 PRSS16Q9NQE7 514 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 UBA2Q9UBT2 640 aaPredicted RBP9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 SLC25A13Q9UJS0 675 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 MMP17Q9ULZ9 603 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 PLA2G4CQ9UP65 541 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 PLXND1Q9Y4D7 1925 aa9.44□□□□□ -0.9
TRIM53AP-201ENST00000532014 ZSCAN5CA6NGD5 496 aaPredicted RBP9.43□□□□□ -0.9
TRIM53AP-201ENST00000532014 PGRMC1O00264 195 aaKnown RBP9.43□□□□□ -0.9
TRIM53AP-201ENST00000532014 PPP1R12AO14974 1030 aaPredicted RBP9.43□□□□□ -0.9
TRIM53AP-201ENST00000532014 NCAM2O15394 837 aa9.43□□□□□ -0.9
TRIM53AP-201ENST00000532014 LIASO43766 372 aa9.43□□□□□ -0.9
TRIM53AP-201ENST00000532014 HLA-DQB2P05538 268 aa9.43□□□□□ -0.9
TRIM53AP-201ENST00000532014 EPHX1P07099 455 aa9.43□□□□□ -0.9
TRIM53AP-201ENST00000532014 RBP3P10745 1247 aa9.43□□□□□ -0.9
TRIM53AP-201ENST00000532014 HOXB2P14652 356 aa9.43□□□□□ -0.9
TRIM53AP-201ENST00000532014 CR2P20023 1033 aa9.43□□□□□ -0.9
TRIM53AP-201ENST00000532014 MX2P20592 715 aa9.43□□□□□ -0.9
TRIM53AP-201ENST00000532014 PTPN3P26045 913 aa9.43□□□□□ -0.9
TRIM53AP-201ENST00000532014 CASQ1P31415 396 aa9.43□□□□□ -0.9
TRIM53AP-201ENST00000532014 GKP32189 559 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms