RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 ATPAF2Q8N5M1 289 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 STYXQ8WUJ0 223 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 GATA6Q92908 595 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 RNF34Q969K3 372 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 MTG1Q9BT17 334 aaPredicted RBP17.11■□□□□ 0.33
VPS26B-206ENST00000531741 GLOD4Q9HC38 313 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 TCF7L2Q9NQB0 619 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 UBP1Q9NZI7 540 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 PPM1HQ9ULR3 514 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 PTPRDP23468 1912 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.11■□□□□ 0.33
VPS26B-206ENST00000531741 TARM1B6A8C7 271 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 SLCO1B7G3V0H7 640 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 M0QZQ0 153 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 GPR182O15218 404 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 HDAC3O15379 428 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 DUSP11O75319 330 aaKnown RBP17.11■□□□□ 0.33
VPS26B-206ENST00000531741 DDHD2O94830 711 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 CHRNA1P02708 482 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 SBK3P0C264 359 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 SLC35E2BP0CK96 405 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 AKR1A1P14550 325 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 BDNFP23560 247 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 ABCG1P45844 678 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 RPL14P50914 215 aaKnown RBP17.11■□□□□ 0.33
VPS26B-206ENST00000531741 USP10Q14694 798 aaKnown RBP17.11■□□□□ 0.33
VPS26B-206ENST00000531741 TMEM154Q6P9G4 183 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 FRMD7Q6ZUT3 714 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 LRRC49Q8IUZ0 686 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 MAPK15Q8TD08 544 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 LBHD1Q9BQE6 289 aaPredicted RBP17.11■□□□□ 0.33
VPS26B-206ENST00000531741 PAAF1Q9BRP4 392 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 TASP1Q9H6P5 420 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 CATSPERBQ9H7T0 1116 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 VTI1BQ9UEU0 232 aa17.11■□□□□ 0.33
VPS26B-206ENST00000531741 MAGEA13PA6NCF6 341 aa17.1■□□□□ 0.33
VPS26B-206ENST00000531741 MATN3O15232 486 aa17.1■□□□□ 0.33
VPS26B-206ENST00000531741 BUD23O43709 281 aaKnown RBP17.1■□□□□ 0.33
VPS26B-206ENST00000531741 MAFKO60675 156 aa17.1■□□□□ 0.33
VPS26B-206ENST00000531741 SNUPNO95149 360 aaKnown RBP17.1■□□□□ 0.33
VPS26B-206ENST00000531741 ADRA1AP35348 466 aa17.1■□□□□ 0.33
VPS26B-206ENST00000531741 RAB27AP51159 221 aa17.1■□□□□ 0.33
VPS26B-206ENST00000531741 GEMP55040 296 aa17.1■□□□□ 0.33
VPS26B-206ENST00000531741 MGAT3Q09327 533 aa17.1■□□□□ 0.33
VPS26B-206ENST00000531741 PRKAA1Q13131 559 aa17.1■□□□□ 0.33
VPS26B-206ENST00000531741 ARTNQ5T4W7 220 aa17.1■□□□□ 0.33
VPS26B-206ENST00000531741 DENND5AQ6IQ26 1287 aa17.1■□□□□ 0.33
VPS26B-206ENST00000531741 RAPH1Q70E73 1250 aa17.1■□□□□ 0.33
VPS26B-206ENST00000531741 FBXW8Q8N3Y1 598 aa17.1■□□□□ 0.33
VPS26B-206ENST00000531741 UCMAQ8WVF2 138 aa17.1■□□□□ 0.33
VPS26B-206ENST00000531741 TTC1Q99614 292 aa17.1■□□□□ 0.33
VPS26B-206ENST00000531741 ECSITQ9BQ95 431 aa17.1■□□□□ 0.33
VPS26B-206ENST00000531741 ENTPD7Q9NQZ7 604 aa17.1■□□□□ 0.33
VPS26B-206ENST00000531741 ABCC13Q9NSE7 274 aa17.1■□□□□ 0.33
VPS26B-206ENST00000531741 SCOCQ9UIL1 159 aa17.1■□□□□ 0.33
VPS26B-206ENST00000531741 AHSGP02765 367 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 GABRB3P28472 473 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 ARCN1P48444 511 aaKnown RBP17.09■□□□□ 0.33
VPS26B-206ENST00000531741 NRG1Q02297 640 aaPredicted RBP17.09■□□□□ 0.33
VPS26B-206ENST00000531741 CCNIQ14094 377 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 AFMIDQ63HM1 303 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 SEL1L3Q68CR1 1132 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 RWDD4Q6NW29 188 aaKnown RBP17.09■□□□□ 0.33
VPS26B-206ENST00000531741 DHDDSQ86SQ9 333 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 SERINC5Q86VE9 423 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 DEFB107AQ8IZN7 70 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 CPSF7Q8N684 471 aaKnown RBP17.09■□□□□ 0.33
VPS26B-206ENST00000531741 SOCS4Q8WXH5 440 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 UBE2OQ9C0C9 1292 aaKnown RBP17.09■□□□□ 0.33
VPS26B-206ENST00000531741 SMOC2Q9H3U7 446 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 ZDHHC7Q9NXF8 308 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.09■□□□□ 0.33
VPS26B-206ENST00000531741 FNIP2Q9P278 1114 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 CPSF2Q9P2I0 782 aaKnown RBP17.09■□□□□ 0.33
VPS26B-206ENST00000531741 NLRC5Q86WI3 1866 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 E9PBE3 544 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 TK2O00142 265 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 DFFAO00273 331 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 KLHL41O60662 606 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 F7P08709 466 aaPredicted RBP17.09■□□□□ 0.33
VPS26B-206ENST00000531741 THRAP10827 490 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 SP100P23497 879 aaPredicted RBP17.09■□□□□ 0.33
VPS26B-206ENST00000531741 GRIA4P48058 902 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 MTTPP55157 894 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 XIAPP98170 497 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 ASPHQ12797 758 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 ITGA7Q13683 1181 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 HNRNPDQ14103 355 aaKnown RBP17.09■□□□□ 0.33
VPS26B-206ENST00000531741 PPP2R5DQ14738 602 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 TIGD7Q6NT04 549 aaPredicted RBP17.09■□□□□ 0.33
VPS26B-206ENST00000531741 CD300LGQ6UXG3 332 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 ARHGAP36Q6ZRI8 547 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 CENPLQ8N0S6 344 aaPredicted RBP17.09■□□□□ 0.33
VPS26B-206ENST00000531741 SLC25A41Q8N5S1 370 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 PPHLN1Q8NEY8 458 aaKnown RBP17.09■□□□□ 0.33
VPS26B-206ENST00000531741 SPATA22Q8NHS9 363 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 PDCD6IPQ8WUM4 868 aaKnown RBP17.09■□□□□ 0.33
VPS26B-206ENST00000531741 OR52B2Q96RD2 323 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 CCDC28BQ9BUN5 200 aa17.09■□□□□ 0.33
VPS26B-206ENST00000531741 TMLHEQ9NVH6 421 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms