RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 SPARCP09486 303 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 SNHG28P0DPA3 235 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 LYL1P12980 280 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 IGFBP2P18065 325 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 NFKBIAP25963 317 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 TM4SF1P30408 202 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 BSGP35613 385 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 HNF1BP35680 557 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 HADHAP40939 763 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 NLRP5P59047 1200 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 SUMO2P61956 95 aaKnown RBP4.73□□□□□ -1.65
USP47-211ENST00000531513 UFM1P61960 85 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 HOXA4Q00056 320 aaPredicted RBP4.73□□□□□ -1.65
USP47-211ENST00000531513 ALKBH1Q13686 389 aaKnown RBP4.73□□□□□ -1.65
USP47-211ENST00000531513 CYP1B1Q16678 543 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 UBAP2Q5T6F2 1119 aaKnown RBP4.73□□□□□ -1.65
USP47-211ENST00000531513 MTHFD1LQ6UB35 978 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 TRIM72Q6ZMU5 477 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 DPY19L3Q6ZPD9 716 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 Q6ZWC4 215 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 PARS2Q7L3T8 475 aaKnown RBP4.73□□□□□ -1.65
USP47-211ENST00000531513 CNTROBQ8N137 903 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 PNPLA1Q8N8W4 532 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 ATP2A3Q93084 1043 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 FEM1CQ96JP0 617 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 RITA1Q96K30 269 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 ZMAT2Q96NC0 199 aaKnown RBP4.73□□□□□ -1.65
USP47-211ENST00000531513 PRR25Q96S07 402 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 EYA3Q99504 573 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 TMEM79Q9BSE2 394 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 THAP7Q9BT49 309 aaPredicted RBP4.73□□□□□ -1.65
USP47-211ENST00000531513 MXD3Q9BW11 206 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 ELOVL1Q9BW60 279 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 CINPQ9BW66 212 aaPredicted RBP4.73□□□□□ -1.65
USP47-211ENST00000531513 TXLNGYQ9BZA5 131 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 SLC22A11Q9NSA0 550 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 CFDP1Q9UEE9 299 aaPredicted RBP4.73□□□□□ -1.65
USP47-211ENST00000531513 KLQ9UEF7 1012 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 ADAMTS5Q9UNA0 930 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 TMEM5Q9Y2B1 443 aa4.73□□□□□ -1.65
USP47-211ENST00000531513 A0A1W2PQM1 296 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 PABPN1LA6NDY0 278 aaKnown RBP4.72□□□□□ -1.65
USP47-211ENST00000531513 NPIPB13A6NJU9 1138 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 NPIPB5A8MRT5 1133 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 NPIPB4C9JG80 1138 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 E5RJQ4 531 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 TMPRSS11DO60235 418 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 GJB3O75712 270 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 RPN1P04843 607 aaKnown RBP4.72□□□□□ -1.65
USP47-211ENST00000531513 DLDP09622 509 aaKnown RBP4.72□□□□□ -1.65
USP47-211ENST00000531513 IL11P20809 199 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 MATN1P21941 496 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 ACSL1P33121 698 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 ABCD1P33897 745 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 RPS6KA3P51812 740 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 LINC00205P59089 165 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 RPL7AP62424 266 aaKnown RBP4.72□□□□□ -1.65
USP47-211ENST00000531513 TXNL4AP83876 142 aaKnown RBP4.72□□□□□ -1.65
USP47-211ENST00000531513 ARHGAP8P85298 464 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 ROR1Q01973 937 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 CCDC15Q0P6D6 951 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 EPS8Q12929 822 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 SLC9B1Q4ZJI4 515 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 SH2D4BQ5SQS7 431 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 SLC30A6Q6NXT4 461 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 MIS18BP1Q6P0N0 1132 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 TMEM88Q6PEY1 159 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 PTCHD4Q6ZW05 846 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 SZRD1Q7Z422 152 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 MON1AQ86VX9 555 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 SIRT6Q8N6T7 355 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 CCDC191Q8NCU4 936 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 KCNJ9Q92806 393 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 YME1L1Q96TA2 773 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 BAG1Q99933 345 aaPredicted RBP4.72□□□□□ -1.65
USP47-211ENST00000531513 LBHD1Q9BQE6 289 aaPredicted RBP4.72□□□□□ -1.65
USP47-211ENST00000531513 RSPH9Q9H1X1 276 aaPredicted RBP4.72□□□□□ -1.65
USP47-211ENST00000531513 ALDH8A1Q9H2A2 487 aaPredicted RBP4.72□□□□□ -1.65
USP47-211ENST00000531513 ERVK-5Q9HDB9 667 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 TRNAU1APQ9NX07 287 aaKnown RBP4.72□□□□□ -1.65
USP47-211ENST00000531513 KLHL13Q9P2N7 655 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 CORO1CQ9ULV4 474 aaPredicted RBP4.72□□□□□ -1.65
USP47-211ENST00000531513 LRP12Q9Y561 859 aa4.72□□□□□ -1.65
USP47-211ENST00000531513 LIPT2A6NK58 231 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 AP4M1O00189 453 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 CES2O00748 559 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 SYN3O14994 580 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 SEC14L2O76054 403 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 BEST1O76090 585 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 KAT7O95251 611 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 PGM3O95394 542 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 NPSP0C0P6 89 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 NR2F1P10589 423 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 GLULP15104 373 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 PRPH2P23942 346 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 DUSP1P28562 367 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 ICAM3P32942 547 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 PSMB10P40306 273 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 JAK3P52333 1124 aa4.71□□□□□ -1.66
USP47-211ENST00000531513 PDE1AP54750 535 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms