RNA–Protein interactions for RNA: ENST00000530405.5

PACSIN3-206, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-206ENST00000530405 ZNF574Q6ZN55 896 aaPredicted RBP16.72■□□□□ 0.27
PACSIN3-206ENST00000530405 USP53Q70EK8 1073 aa16.72■□□□□ 0.27
PACSIN3-206ENST00000530405 SGF29Q96ES7 293 aa16.72■□□□□ 0.27
PACSIN3-206ENST00000530405 RPRD1AQ96P16 312 aaPredicted RBP16.72■□□□□ 0.27
PACSIN3-206ENST00000530405 ARHGAP9Q9BRR9 750 aa16.72■□□□□ 0.27
PACSIN3-206ENST00000530405 SLC17A9Q9BYT1 436 aa16.72■□□□□ 0.27
PACSIN3-206ENST00000530405 KLF15Q9UIH9 416 aa16.72■□□□□ 0.27
PACSIN3-206ENST00000530405 PCDHGA7Q9Y5G6 932 aa16.72■□□□□ 0.27
PACSIN3-206ENST00000530405 AHCTF1Q8WYP5 2266 aa16.72■□□□□ 0.27
PACSIN3-206ENST00000530405 DOPEY2Q9Y3R5 2298 aa16.72■□□□□ 0.27
PACSIN3-206ENST00000530405 ITGB6P18564 788 aa16.71■□□□□ 0.27
PACSIN3-206ENST00000530405 RABIFP47224 123 aa16.71■□□□□ 0.27
PACSIN3-206ENST00000530405 RPIAP49247 311 aa16.71■□□□□ 0.27
PACSIN3-206ENST00000530405 PDX1P52945 283 aa16.71■□□□□ 0.27
PACSIN3-206ENST00000530405 RPS21P63220 83 aaKnown RBP16.71■□□□□ 0.27
PACSIN3-206ENST00000530405 CENPCQ03188 943 aa16.71■□□□□ 0.27
PACSIN3-206ENST00000530405 DEFB133Q30KQ1 61 aa16.71■□□□□ 0.27
PACSIN3-206ENST00000530405 KIAA1161Q6NSJ0 714 aa16.71■□□□□ 0.27
PACSIN3-206ENST00000530405 CRTC1Q6UUV9 634 aa16.71■□□□□ 0.27
PACSIN3-206ENST00000530405 STK32AQ8WU08 396 aa16.71■□□□□ 0.27
PACSIN3-206ENST00000530405 GLMNQ92990 594 aa16.71■□□□□ 0.27
PACSIN3-206ENST00000530405 NAT6Q93015 286 aa16.71■□□□□ 0.27
PACSIN3-206ENST00000530405 SLC35C1Q96A29 364 aa16.71■□□□□ 0.27
PACSIN3-206ENST00000530405 LIN37Q96GY3 246 aaPredicted RBP16.71■□□□□ 0.27
PACSIN3-206ENST00000530405 IL12RB2Q99665 862 aa16.71■□□□□ 0.27
PACSIN3-206ENST00000530405 SEMA3CQ99985 751 aa16.71■□□□□ 0.27
PACSIN3-206ENST00000530405 BOCQ9BWV1 1114 aa16.71■□□□□ 0.27
PACSIN3-206ENST00000530405 ACSL6Q9UKU0 697 aa16.71■□□□□ 0.27
PACSIN3-206ENST00000530405 TBC1D30Q9Y2I9 924 aa16.71■□□□□ 0.27
PACSIN3-206ENST00000530405 CLDN11O75508 207 aa16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 PAK4O96013 591 aaPredicted RBP16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 MT-CO1P00395 513 aa16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 CALCAP01258 141 aa16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 AFPP02771 609 aaKnown RBP16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 JUNDP17535 347 aa16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 CCR1P32246 355 aa16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 SYKP43405 635 aa16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 PITX1P78337 314 aaPredicted RBP16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 KRT83P78385 493 aa16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 DNM1Q05193 864 aaKnown RBP16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 MTA1Q13330 715 aa16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 EIF3IQ13347 325 aaKnown RBP16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 AUHQ13825 339 aaKnown RBP16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 SPIDRQ14159 915 aa16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 FGL2Q14314 439 aa16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 ATP11CQ8NB49 1132 aa16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 LMX1AQ8TE12 382 aa16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 BTN2A2Q8WVV5 523 aa16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 PPP1R16AQ96I34 528 aa16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 FEM1CQ96JP0 617 aa16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 NT5C1BQ96P26 610 aa16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 MED15Q96RN5 788 aa16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 C2orf49Q9BVC5 232 aaPredicted RBP16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 SLC4A5Q9BY07 1137 aa16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 THAP9Q9H5L6 903 aa16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 IPO11Q9UI26 975 aaKnown RBP16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 BSNQ9UPA5 3926 aa16.7■□□□□ 0.26
PACSIN3-206ENST00000530405 FAM237AA0A1B0GTK4 181 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 RNF103O00237 685 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 NTN3O00634 580 aaPredicted RBP16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 PLD2O14939 933 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 MUSKO15146 869 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 RAD51BO15315 384 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 NOBOXO60393 691 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 SLC5A2P31639 672 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 IRAK1P51617 712 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 CLCN6P51797 869 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 NFKB2Q00653 900 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 FKBP3Q00688 224 aaKnown RBP16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 MAPK8IP2Q13387 824 aaPredicted RBP16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 PDE1CQ14123 709 aaPredicted RBP16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 DRAP1Q14919 205 aaPredicted RBP16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 TMEM110Q86TL2 294 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 ZSCAN30Q86W11 494 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 SLC35F3Q8IY50 421 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 SMYD4Q8IYR2 804 aaPredicted RBP16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 PPM1KQ8N3J5 372 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 EXTL1Q92935 676 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 LENG8Q96PV6 779 aaPredicted RBP16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 CCDC3Q9BQI4 270 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 MUC3BQ9H195 1237 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 FAM204AQ9H8W3 233 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 SPASTQ9UBP0 616 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 ARMCX3Q9UH62 379 aaPredicted RBP16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 IL36AQ9UHA7 158 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 VANGL2Q9ULK5 521 aa16.69■□□□□ 0.26
PACSIN3-206ENST00000530405 TEX15Q9BXT5 2789 aa16.68■□□□□ 0.26
PACSIN3-206ENST00000530405 E5RJQ4 531 aa16.68■□□□□ 0.26
PACSIN3-206ENST00000530405 K7ERQ8 282 aa16.68■□□□□ 0.26
PACSIN3-206ENST00000530405 FPGTO14772 594 aa16.68■□□□□ 0.26
PACSIN3-206ENST00000530405 PMM2O15305 246 aa16.68■□□□□ 0.26
PACSIN3-206ENST00000530405 NEK3P51956 506 aa16.68■□□□□ 0.26
PACSIN3-206ENST00000530405 NDUFA8P51970 172 aa16.68■□□□□ 0.26
PACSIN3-206ENST00000530405 CDH4P55283 916 aa16.68■□□□□ 0.26
PACSIN3-206ENST00000530405 CDK17Q00537 523 aa16.68■□□□□ 0.26
PACSIN3-206ENST00000530405 MEA1Q16626 185 aa16.68■□□□□ 0.26
PACSIN3-206ENST00000530405 C5orf22Q49AR2 442 aa16.68■□□□□ 0.26
PACSIN3-206ENST00000530405 ARSIQ5FYB1 569 aa16.68■□□□□ 0.26
PACSIN3-206ENST00000530405 C14orf80Q86SX3 495 aa16.68■□□□□ 0.26
PACSIN3-206ENST00000530405 CHST14Q8NCH0 376 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms