RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 PIAS3Q9Y6X2 628 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 DOCK5Q9H7D0 1870 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 FRMPD4Q14CM0 1322 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 DOCK6Q96HP0 2047 aa7.44□□□□□ -1.22
SVIP-204ENST00000530199 PTPRQQ9UMZ3 2332 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 A0A087WWL8 130 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 hCG_1642624A0A1W2PR95 340 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 CDHR4A6H8M9 788 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 PYCARD-AS1I3L0S3 204 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 GPAA1O43292 621 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 AGFG2O95081 481 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 GRPP07492 148 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 EEF1GP26641 437 aaKnown RBP7.43□□□□□ -1.22
SVIP-204ENST00000530199 HOXC13P31276 330 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 KCNC1P48547 511 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 ZNF135P52742 658 aaPredicted RBP7.43□□□□□ -1.22
SVIP-204ENST00000530199 IRX4P78413 519 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 POU6F2P78424 691 aaPredicted RBP7.43□□□□□ -1.22
SVIP-204ENST00000530199 MXRA7P84157 204 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 SP4Q02446 784 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 LMAN2Q12907 356 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 DDX10Q13206 875 aaKnown RBP7.43□□□□□ -1.22
SVIP-204ENST00000530199 STARD3Q14849 445 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 QRICH1Q2TAL8 776 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 CRB2Q5IJ48 1285 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 NT5DC1Q5TFE4 455 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 PGBD2Q6P3X8 592 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 Q6ZS52 159 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 UNC13DQ70J99 1090 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 BEND5Q7L4P6 421 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 APBB1IPQ7Z5R6 666 aaPredicted RBP7.43□□□□□ -1.22
SVIP-204ENST00000530199 USP37Q86T82 979 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 LGI4Q8N135 537 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 TXLNBQ8N3L3 684 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 ZNF527Q8NB42 609 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 TMIEQ8NEW7 156 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 ZNF566Q969W8 418 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 WBP1Q96G27 269 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 TTC14Q96N46 770 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 LRRC37BQ96QE4 947 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 TMEM175Q9BSA9 504 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 NACAP1Q9BZK3 213 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 TINAGL1Q9GZM7 467 aaPredicted RBP7.43□□□□□ -1.22
SVIP-204ENST00000530199 BOLA2Q9H3K6 86 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 GDE1Q9NZC3 331 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 DNAJB4Q9UDY4 337 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 MAGED2Q9UNF1 606 aaPredicted RBP7.43□□□□□ -1.22
SVIP-204ENST00000530199 AGAP1Q9UPQ3 857 aa7.43□□□□□ -1.22
SVIP-204ENST00000530199 MBD3L4A6NDZ8 208 aaPredicted RBP7.42□□□□□ -1.22
SVIP-204ENST00000530199 MBD3L3A6NE82 208 aaPredicted RBP7.42□□□□□ -1.22
SVIP-204ENST00000530199 TMEM233B4DJY2 109 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 FFAR2O15552 330 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 THAP12O43422 761 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 ORC4O43929 436 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 SPATA31D3P0C874 917 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 GP1BBP13224 206 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 SLC6A2P23975 617 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 FCARP24071 287 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 RPS19P39019 145 aaKnown RBP7.42□□□□□ -1.22
SVIP-204ENST00000530199 GRK6P43250 576 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 GLUD2P49448 558 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 PPM1FP49593 454 aaPredicted RBP7.42□□□□□ -1.22
SVIP-204ENST00000530199 UCP3P55916 312 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 NTHL1P78549 312 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 KARSQ15046 597 aaKnown RBP7.42□□□□□ -1.22
SVIP-204ENST00000530199 PRR16Q569H4 304 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 NOMO2Q5JPE7 1267 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 TANGO2Q6ICL3 276 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 OGFOD2Q6N063 350 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 SPATA31D4Q6ZUB0 917 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 ADGRF4Q8IZF3 695 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 CLASRPQ8N2M8 674 aaKnown RBP7.42□□□□□ -1.22
SVIP-204ENST00000530199 MPP5Q8N3R9 675 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 SLC15A4Q8N697 577 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 FITM2Q8N6M3 262 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 RNF169Q8NCN4 708 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 OR56A3Q8NH54 315 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 TRAPPC12Q8WVT3 735 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 CCT6BQ92526 530 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 TMEM176AQ96HP8 235 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 SCLT1Q96NL6 688 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 PCYT2Q99447 389 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 CPPED1Q9BRF8 314 aaPredicted RBP7.42□□□□□ -1.22
SVIP-204ENST00000530199 TRMT61BQ9BVS5 477 aaKnown RBP7.42□□□□□ -1.22
SVIP-204ENST00000530199 UBA5Q9GZZ9 404 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 CHST8Q9H2A9 424 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.42□□□□□ -1.22
SVIP-204ENST00000530199 TSC2P49815 1807 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 C2CD3Q4AC94 2353 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 CREBBPQ92793 2442 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 EML5Q05BV3 1969 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 NUP205Q92621 2012 aa7.42□□□□□ -1.22
SVIP-204ENST00000530199 MGAQ8IWI9 3026 aa7.41□□□□□ -1.22
SVIP-204ENST00000530199 CLCA1A8K7I4 914 aa7.41□□□□□ -1.22
SVIP-204ENST00000530199 RANBP6O60518 1105 aaKnown RBP7.41□□□□□ -1.22
SVIP-204ENST00000530199 CHEK2O96017 543 aa7.41□□□□□ -1.22
SVIP-204ENST00000530199 PIM1P11309 404 aaPredicted RBP7.41□□□□□ -1.22
SVIP-204ENST00000530199 KCNA2P16389 499 aa7.41□□□□□ -1.22
SVIP-204ENST00000530199 CCNE1P24864 410 aa7.41□□□□□ -1.22
SVIP-204ENST00000530199 KLRC1P26715 233 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms