RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 ORC3Q9UBD5 711 aaPredicted RBP4.96□□□□□ -1.62
C11orf88-204ENST00000529661 COG5Q9UP83 839 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 SLC8A2Q9UPR5 921 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 DTX4Q9Y2E6 619 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 RUSC2Q8N2Y8 1516 aa4.96□□□□□ -1.62
C11orf88-204ENST00000529661 TNPO2O14787 897 aaKnown RBP4.95□□□□□ -1.62
C11orf88-204ENST00000529661 RNASEH2AO75792 299 aaKnown RBP4.95□□□□□ -1.62
C11orf88-204ENST00000529661 CYP4B1P13584 511 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 TGM2P21980 687 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 GGT5P36269 586 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 CCR9P51686 369 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 OAZ1P54368 228 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 CDH15P55291 814 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 GOLGA8FQ08AF8 430 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 FHL1Q13642 323 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 KRT32Q14532 448 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 PGM5Q15124 567 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 SLC45A4Q5BKX6 768 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 FAM69AQ5T7M9 428 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 SPATA1Q5VX52 437 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 NAPEPLDQ6IQ20 393 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 TMTC3Q6ZXV5 915 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 RTL10Q7L3V2 364 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 GALNT7Q86SF2 657 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 ADGRG6Q86SQ4 1221 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 PIM3Q86V86 326 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 CHD1LQ86WJ1 897 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 BRSK2Q8IWQ3 736 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 C9orf106Q8NAJ2 232 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 RFWD2Q8NHY2 731 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 NFKBIDQ8NI38 313 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 MPLKIPQ8TAP9 179 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 C2CD4CQ8TF44 421 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 UBE2Q2Q8WVN8 375 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 ZFPM2Q8WW38 1151 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 RUFY2Q8WXA3 655 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 NCSTNQ92542 709 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 VCPIP1Q96JH7 1222 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 TREX2Q9BQ50 279 aaPredicted RBP4.95□□□□□ -1.62
C11orf88-204ENST00000529661 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.95□□□□□ -1.62
C11orf88-204ENST00000529661 TMX4Q9H1E5 349 aaPredicted RBP4.95□□□□□ -1.62
C11orf88-204ENST00000529661 MROH8Q9H579 483 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 AAMDCQ9H7C9 122 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.95□□□□□ -1.62
C11orf88-204ENST00000529661 ALKBH4Q9NXW9 302 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 MSRB1Q9NZV6 116 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 TBC1D14Q9P2M4 693 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 HDAC6Q9UBN7 1215 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 PKP3Q9Y446 797 aa4.95□□□□□ -1.62
C11orf88-204ENST00000529661 SETD1BQ9UPS6 1966 aaKnown RBP4.95□□□□□ -1.62
C11orf88-204ENST00000529661 A0A1W2PPC1 479 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 C17orf100A8MU93 164 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 MCIDASD6RGH6 385 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 TSPAN4O14817 238 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 NTN1O95631 604 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 URODP06132 367 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 UBL4AP11441 157 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 EPHA8P29322 1005 aaPredicted RBP4.94□□□□□ -1.62
C11orf88-204ENST00000529661 GJC1P36383 396 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 MTNR1AP48039 350 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 BYSLQ13895 437 aaKnown RBP4.94□□□□□ -1.62
C11orf88-204ENST00000529661 NAA25Q14CX7 972 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 MIDNQ504T8 468 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 UBAP2Q5T6F2 1119 aaKnown RBP4.94□□□□□ -1.62
C11orf88-204ENST00000529661 GJB7Q6PEY0 223 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 ZNF474Q6S9Z5 364 aaPredicted RBP4.94□□□□□ -1.62
C11orf88-204ENST00000529661 BRINP3Q76B58 766 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 MDGA2Q7Z553 956 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 DIS3L2Q8IYB7 885 aaKnown RBP4.94□□□□□ -1.62
C11orf88-204ENST00000529661 MMP21Q8N119 569 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 ANKRD52Q8NB46 1076 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 SLC44A5Q8NCS7 719 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 ZMIZ2Q8NF64 920 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 FAM110DQ8TAY7 271 aaPredicted RBP4.94□□□□□ -1.62
C11orf88-204ENST00000529661 NLRP4Q96MN2 994 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 NEUROD6Q96NK8 337 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 ZNF347Q96SE7 839 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 NPLQ9BXD5 320 aaPredicted RBP4.94□□□□□ -1.62
C11orf88-204ENST00000529661 PDCL3Q9H2J4 239 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 TTC12Q9H892 705 aaPredicted RBP4.94□□□□□ -1.62
C11orf88-204ENST00000529661 UTS2RQ9UKP6 389 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 KDM3AQ9Y4C1 1321 aa4.94□□□□□ -1.62
C11orf88-204ENST00000529661 TRBV5-3A0A0A0MS03 114 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 ANKRD18BA2A2Z9 1011 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 PI4KAP2A4QPH2 592 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 DPPA5A6NC42 116 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 ZBED4O75132 1171 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 NDUFB8O95169 186 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 CRYABP02511 175 aaKnown RBP4.93□□□□□ -1.62
C11orf88-204ENST00000529661 CHMP24386 653 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 CIITAP33076 1130 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 POLD2P49005 469 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 TDGQ13569 410 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 MANEAQ5SRI9 462 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 LRIG3Q6UXM1 1119 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 B4GALNT4Q76KP1 1039 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 VPS52Q8N1B4 723 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 NGEFQ8N5V2 710 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 FAM47BQ8NA70 645 aa4.93□□□□□ -1.62
C11orf88-204ENST00000529661 TNIP2Q8NFZ5 429 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms