RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 MAFKO60675 156 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 PHF2O75151 1096 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 ADH1BP00325 375 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 SERPINF2P08697 491 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 CTAGE8P0CG41 777 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 SERPINA4P29622 427 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 CXCR5P32302 372 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 SLC6A11P48066 632 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 MARCKSL1P49006 195 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 SGSHP51688 502 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 RHOAP61586 193 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 GBE1Q04446 702 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 LAMB3Q13751 1172 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 PRKD1Q15139 912 aaPredicted RBP8.07□□□□□ -1.12
SSBP3-211ENST00000528787 GEN1Q17RS7 908 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 GAB4Q2WGN9 574 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 HNRNPA1L2Q32P51 320 aaKnown RBP8.07□□□□□ -1.12
SSBP3-211ENST00000528787 FSCBQ5H9T9 825 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 DCAF12L1Q5VU92 463 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 ARMC3Q5W041 872 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 FSTL4Q6MZW2 842 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 ARHGEF18Q6ZSZ5 1173 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 CEP128Q6ZU80 1094 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 CTAGE6Q86UF2 777 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 KBTBD6Q86V97 674 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 CTAGE4Q8IX94 777 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 PHTF2Q8N3S3 785 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 OR2AP1Q8NGE2 309 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 TTC8Q8TAM2 541 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 OR8D1Q8WZ84 308 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 MAML1Q92585 1016 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 MAGOHBQ96A72 148 aaKnown RBP8.07□□□□□ -1.12
SSBP3-211ENST00000528787 CLDN23Q96B33 292 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 ALG14Q96F25 216 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 CELF6Q96J87 481 aaKnown RBP8.07□□□□□ -1.12
SSBP3-211ENST00000528787 LMLNQ96KR4 655 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 ZNF641Q96N77 438 aaPredicted RBP8.07□□□□□ -1.12
SSBP3-211ENST00000528787 PSMB7Q99436 277 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 GABRG3Q99928 467 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 ADGRE3Q9BY15 652 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 FAM126AQ9BYI3 521 aaPredicted RBP8.07□□□□□ -1.12
SSBP3-211ENST00000528787 CPEB1Q9BZB8 566 aaKnown RBP8.07□□□□□ -1.12
SSBP3-211ENST00000528787 KLC2Q9H0B6 622 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 IRF2BPLQ9H1B7 796 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 ATP13A3Q9H7F0 1226 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 LMAN1LQ9HAT1 526 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 PAK5Q9P286 719 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 KLHL8Q9P2G9 620 aaPredicted RBP8.07□□□□□ -1.12
SSBP3-211ENST00000528787 MMP17Q9ULZ9 603 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 NDRG2Q9UN36 371 aaKnown RBP8.07□□□□□ -1.12
SSBP3-211ENST00000528787 NCKAP1Q9Y2A7 1128 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 SNX10Q9Y5X0 201 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 PRUNE2Q8WUY3 3088 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 MYO18AQ92614 2054 aaKnown RBP8.07□□□□□ -1.12
SSBP3-211ENST00000528787 C5orf42Q9H799 3197 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 XIRP2A4UGR9 3374 aa8.07□□□□□ -1.12
SSBP3-211ENST00000528787 A0A0D9SEW6 157 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 C5orf60A6NFR6 353 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 TMEM221A6NGB7 291 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 OTOL1A6NHN0 477 aaPredicted RBP8.06□□□□□ -1.12
SSBP3-211ENST00000528787 K7EQS6 105 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 M0R296 226 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 LIASO43766 372 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 SOCS5O75159 536 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 ZNF217O75362 1048 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 ZMPSTE24O75844 475 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 ECEL1O95672 775 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 DNTTP04053 509 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 EPHX1P07099 455 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 CHRNB1P11230 501 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 ACADMP11310 421 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 HOXB2P14652 356 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 AOC1P19801 751 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 MZF1P28698 734 aaPredicted RBP8.06□□□□□ -1.12
SSBP3-211ENST00000528787 TIE1P35590 1138 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 FDFT1P37268 417 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 KIR2DL1P43626 348 aaPredicted RBP8.06□□□□□ -1.12
SSBP3-211ENST00000528787 SOX9P48436 509 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 GEMP55040 296 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 RPL26P61254 145 aaKnown RBP8.06□□□□□ -1.12
SSBP3-211ENST00000528787 ITKQ08881 620 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 ENPP2Q13822 863 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 ZNF234Q14588 700 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 PPP1R7Q15435 360 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 DLG2Q15700 870 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 CYP1B1Q16678 543 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 GLE1Q53GS7 698 aaKnown RBP8.06□□□□□ -1.12
SSBP3-211ENST00000528787 TEX44Q53QW1 395 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 CARD16Q5EG05 197 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 ASTLQ6HA08 431 aaPredicted RBP8.06□□□□□ -1.12
SSBP3-211ENST00000528787 C22orf39Q6P5X5 142 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 CCDC137Q6PK04 289 aaKnown RBP8.06□□□□□ -1.12
SSBP3-211ENST00000528787 PID1Q7Z2X4 250 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 LINC00523Q86TU6 105 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 ZC3H18Q86VM9 953 aaKnown RBP8.06□□□□□ -1.12
SSBP3-211ENST00000528787 C12orf40Q86WS4 652 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 ARHGAP12Q8IWW6 846 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 APCDD1Q8J025 514 aa8.06□□□□□ -1.12
SSBP3-211ENST00000528787 RYBPQ8N488 228 aaPredicted RBP8.06□□□□□ -1.12
SSBP3-211ENST00000528787 TEX26Q8N6G2 289 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms