RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PLPP6Q8IY26 295 aa33.73■■■□□ 2.99
SSSCA1-205ENST00000527920 PYROXD2Q8N2H3 581 aa33.73■■■□□ 2.99
SSSCA1-205ENST00000527920 EIF3CQ99613 913 aaKnown RBP33.73■■■□□ 2.99
SSSCA1-205ENST00000527920 ISCUQ9H1K1 167 aa33.73■■■□□ 2.99
SSSCA1-205ENST00000527920 GAREM1Q9H706 876 aa33.73■■■□□ 2.99
SSSCA1-205ENST00000527920 HPCAL4Q9UM19 191 aa33.73■■■□□ 2.99
SSSCA1-205ENST00000527920 CHD5Q8TDI0 1954 aa33.72■■■□□ 2.99
SSSCA1-205ENST00000527920 WASH4PA8MWX3 477 aa33.72■■■□□ 2.99
SSSCA1-205ENST00000527920 ATMINO43313 823 aaPredicted RBP33.72■■■□□ 2.99
SSSCA1-205ENST00000527920 SKILP12757 684 aa33.72■■■□□ 2.99
SSSCA1-205ENST00000527920 PSMA2P25787 234 aa33.72■■■□□ 2.99
SSSCA1-205ENST00000527920 ZNF252P-AS1Q0IIN9 211 aa33.72■■■□□ 2.99
SSSCA1-205ENST00000527920 HLA-BQ31612 363 aa33.72■■■□□ 2.99
SSSCA1-205ENST00000527920 CNOT8Q9UFF9 292 aaKnown RBP33.72■■■□□ 2.99
SSSCA1-205ENST00000527920 ANKRD6Q9Y2G4 727 aa33.72■■■□□ 2.99
SSSCA1-205ENST00000527920 KNL1Q8NG31 2342 aa33.71■■■□□ 2.99
SSSCA1-205ENST00000527920 CD160O95971 181 aa33.71■■■□□ 2.99
SSSCA1-205ENST00000527920 SHC2P98077 582 aa33.71■■■□□ 2.99
SSSCA1-205ENST00000527920 POLD3Q15054 466 aaPredicted RBP33.71■■■□□ 2.99
SSSCA1-205ENST00000527920 KIF19Q2TAC6 998 aa33.71■■■□□ 2.99
SSSCA1-205ENST00000527920 DPY19L3Q6ZPD9 716 aa33.71■■■□□ 2.99
SSSCA1-205ENST00000527920 TRIM69Q86WT6 500 aa33.71■■■□□ 2.99
SSSCA1-205ENST00000527920 ZNF653Q96CK0 615 aa33.71■■■□□ 2.99
SSSCA1-205ENST00000527920 TNKS2Q9H2K2 1166 aa33.71■■■□□ 2.99
SSSCA1-205ENST00000527920 CATSPERBQ9H7T0 1116 aa33.71■■■□□ 2.99
SSSCA1-205ENST00000527920 EBF2Q9HAK2 575 aa33.71■■■□□ 2.99
SSSCA1-205ENST00000527920 PREBQ9HCU5 417 aa33.71■■■□□ 2.99
SSSCA1-205ENST00000527920 MRPL47Q9HD33 250 aaKnown RBP33.71■■■□□ 2.99
SSSCA1-205ENST00000527920 DONSONQ9NYP3 566 aa33.71■■■□□ 2.99
SSSCA1-205ENST00000527920 IFNKQ9P0W0 207 aa33.71■■■□□ 2.99
SSSCA1-205ENST00000527920 IL36AQ9UHA7 158 aa33.71■■■□□ 2.99
SSSCA1-205ENST00000527920 PCNX2A6NKB5 2137 aa33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 TBC1D3DA0A087WVF3 549 aa33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 TBC1D3IA0A087WXS9 549 aa33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 TBC1D3EA0A087X179 549 aa33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 TBC1D3KA0A087X1G2 549 aa33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 TBC1D3FA6NER0 549 aaPredicted RBP33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 ZSCAN5CA6NGD5 496 aaPredicted RBP33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 TBC1D3LB9A6J9 549 aa33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 VILLO15195 856 aa33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 FGF10O15520 208 aaPredicted RBP33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 TPM3P06753 285 aa33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 TBC1D3HP0C7X1 549 aa33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 YBEYP58557 167 aaPredicted RBP33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 TDRD12Q587J7 1177 aaKnown RBP33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 TBC1D3GQ6DHY5 549 aa33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 TBC1D3CQ6IPX1 549 aa33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 VPS36Q86VN1 386 aa33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 TBC1D3Q8IZP1 549 aaPredicted RBP33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 CHST14Q8NCH0 376 aa33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 SKA1Q96BD8 255 aa33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 NCAPGQ9BPX3 1015 aa33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 PCDHGB2Q9Y5G2 931 aa33.7■■■□□ 2.99
SSSCA1-205ENST00000527920 TPRP12270 2363 aaKnown RBP33.69■■■□□ 2.98
SSSCA1-205ENST00000527920 PLK4O00444 970 aa33.69■■■□□ 2.98
SSSCA1-205ENST00000527920 KPNA3O00505 521 aaPredicted RBP33.69■■■□□ 2.98
SSSCA1-205ENST00000527920 SERPING1P05155 500 aa33.69■■■□□ 2.98
SSSCA1-205ENST00000527920 PIP5KL1Q5T9C9 394 aa33.69■■■□□ 2.98
SSSCA1-205ENST00000527920 PPP1R16AQ96I34 528 aa33.69■■■□□ 2.98
SSSCA1-205ENST00000527920 SLC6A18Q96N87 628 aa33.69■■■□□ 2.98
SSSCA1-205ENST00000527920 HDAC8Q9BY41 377 aa33.69■■■□□ 2.98
SSSCA1-205ENST00000527920 NOL6Q9H6R4 1146 aaKnown RBP33.69■■■□□ 2.98
SSSCA1-205ENST00000527920 DYRK4Q9NR20 520 aa33.69■■■□□ 2.98
SSSCA1-205ENST00000527920 FNDC3AQ9Y2H6 1198 aaKnown RBP33.69■■■□□ 2.98
SSSCA1-205ENST00000527920 LUC7L2Q9Y383 392 aaKnown RBP33.69■■■□□ 2.98
SSSCA1-205ENST00000527920 WASF2Q9Y6W5 498 aa33.69■■■□□ 2.98
SSSCA1-205ENST00000527920 KDELR3O43731 214 aa33.68■■■□□ 2.98
SSSCA1-205ENST00000527920 CREB3O43889 395 aa33.68■■■□□ 2.98
SSSCA1-205ENST00000527920 RNF8O76064 485 aa33.68■■■□□ 2.98
SSSCA1-205ENST00000527920 PPP2CBP62714 309 aa33.68■■■□□ 2.98
SSSCA1-205ENST00000527920 PPP2CAP67775 309 aa33.68■■■□□ 2.98
SSSCA1-205ENST00000527920 POM121L1PQ3SYA9 428 aa33.68■■■□□ 2.98
SSSCA1-205ENST00000527920 CARD16Q5EG05 197 aa33.68■■■□□ 2.98
SSSCA1-205ENST00000527920 NEK5Q6P3R8 708 aa33.68■■■□□ 2.98
SSSCA1-205ENST00000527920 ADAT2Q7Z6V5 191 aaKnown RBP33.68■■■□□ 2.98
SSSCA1-205ENST00000527920 DNAAF5Q86Y56 855 aa33.68■■■□□ 2.98
SSSCA1-205ENST00000527920 PSTKQ8IV42 348 aaKnown RBP33.68■■■□□ 2.98
SSSCA1-205ENST00000527920 UMODL1-AS1Q8N2C9 162 aa33.68■■■□□ 2.98
SSSCA1-205ENST00000527920 HEPHQ9BQS7 1158 aa33.68■■■□□ 2.98
SSSCA1-205ENST00000527920 IL21RQ9HBE5 538 aa33.68■■■□□ 2.98
SSSCA1-205ENST00000527920 TM7SF3Q9NS93 570 aa33.68■■■□□ 2.98
SSSCA1-205ENST00000527920 ANGPTL2Q9UKU9 493 aa33.68■■■□□ 2.98
SSSCA1-205ENST00000527920 DMTF1Q9Y222 760 aa33.68■■■□□ 2.98
SSSCA1-205ENST00000527920 FCF1Q9Y324 198 aaKnown RBP33.68■■■□□ 2.98
SSSCA1-205ENST00000527920 SNX11Q9Y5W9 270 aa33.68■■■□□ 2.98
SSSCA1-205ENST00000527920 ACACBO00763 2458 aa33.67■■■□□ 2.98
SSSCA1-205ENST00000527920 GYPCP04921 128 aa33.67■■■□□ 2.98
SSSCA1-205ENST00000527920 CTSKP43235 329 aa33.67■■■□□ 2.98
SSSCA1-205ENST00000527920 TAS2R38P59533 333 aa33.67■■■□□ 2.98
SSSCA1-205ENST00000527920 PARP15Q460N3 678 aa33.67■■■□□ 2.98
SSSCA1-205ENST00000527920 ARFGAP1Q8N6T3 406 aa33.67■■■□□ 2.98
SSSCA1-205ENST00000527920 CASKIN2Q8WXE0 1202 aa33.67■■■□□ 2.98
SSSCA1-205ENST00000527920 AP4E1Q9UPM8 1137 aa33.67■■■□□ 2.98
SSSCA1-205ENST00000527920 DFNA5O60443 496 aa33.66■■■□□ 2.98
SSSCA1-205ENST00000527920 LEFTY1O75610 366 aa33.66■■■□□ 2.98
SSSCA1-205ENST00000527920 CCNHP51946 323 aaPredicted RBP33.66■■■□□ 2.98
SSSCA1-205ENST00000527920 ACAP1Q15027 740 aa33.66■■■□□ 2.98
SSSCA1-205ENST00000527920 ARSIQ5FYB1 569 aa33.66■■■□□ 2.98
SSSCA1-205ENST00000527920 NAPEPLDQ6IQ20 393 aa33.66■■■□□ 2.98
SSSCA1-205ENST00000527920 DBX2Q6ZNG2 339 aa33.66■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms