RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 POLD3Q15054 466 aaPredicted RBP12.67□□□□□ -0.38
TSKU-203ENST00000527881 PDK2Q15119 407 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 DOK7Q18PE1 504 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 OTUD3Q5T2D3 398 aaPredicted RBP12.67□□□□□ -0.38
TSKU-203ENST00000527881 HEATR6Q6AI08 1181 aaKnown RBP12.67□□□□□ -0.38
TSKU-203ENST00000527881 OR6B2Q6IFH4 312 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 AKAP14Q86UN6 197 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 LINC00116Q8NCU8 138 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 SLCO4A1Q96BD0 722 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 MROQ9BYG7 248 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 SPC25Q9HBM1 224 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 TMEM9Q9P0T7 183 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 IFT80Q9P2H3 777 aaPredicted RBP12.67□□□□□ -0.38
TSKU-203ENST00000527881 GMPR2Q9P2T1 348 aaKnown RBP12.67□□□□□ -0.38
TSKU-203ENST00000527881 KLHL3Q9UH77 587 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 SEPT9Q9UHD8 586 aaPredicted RBP12.67□□□□□ -0.38
TSKU-203ENST00000527881 ZDHHC2Q9UIJ5 367 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 CCDC78A2IDD5 438 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 AURKAO14965 403 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 NCAM1P13591 858 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 SPP2Q13103 211 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 PRKAA1Q13131 559 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 FASTKQ14296 549 aaKnown RBP12.67□□□□□ -0.38
TSKU-203ENST00000527881 INSCQ1MX18 579 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 PRR23BQ6ZRT6 265 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 ZBTB33Q86T24 672 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 SIAH1Q8IUQ4 282 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 CDKL3Q8IVW4 592 aaPredicted RBP12.67□□□□□ -0.38
TSKU-203ENST00000527881 SEPT8Q92599 483 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 CPXM1Q96SM3 734 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 ZNF518BQ9C0D4 1074 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 SLC39A10Q9ULF5 831 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 FZD1Q9UP38 647 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 B3GNT3Q9Y2A9 372 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 ZNF541Q9H0D2 1346 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 DOT1LQ8TEK3 1739 aa12.67□□□□□ -0.38
TSKU-203ENST00000527881 TAF4O00268 1085 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 CST3P01034 146 aaPredicted RBP12.66□□□□□ -0.38
TSKU-203ENST00000527881 IL1R1P14778 569 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 SPRP35270 261 aaPredicted RBP12.66□□□□□ -0.38
TSKU-203ENST00000527881 TUFMP49411 452 aaKnown RBP12.66□□□□□ -0.38
TSKU-203ENST00000527881 MLLT10P55197 1068 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 LSM3P62310 102 aaKnown RBP12.66□□□□□ -0.38
TSKU-203ENST00000527881 KRT76Q01546 638 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 EN1Q05925 392 aaPredicted RBP12.66□□□□□ -0.38
TSKU-203ENST00000527881 INPP5AQ14642 412 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 PAGE2BQ5JRK9 111 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 CRTC3Q6UUV7 619 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 MAMDC4Q6UXC1 1216 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 SPPL2CQ8IUH8 684 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 RAB2BQ8WUD1 216 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 SLC7A3Q8WY07 619 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 GMCL1Q96IK5 515 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 PEBP4Q96S96 227 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 C9orf16Q9BUW7 83 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 TARS2Q9BW92 718 aaKnown RBP12.66□□□□□ -0.38
TSKU-203ENST00000527881 ACE2Q9BYF1 805 aaPredicted RBP12.66□□□□□ -0.38
TSKU-203ENST00000527881 MUC3BQ9H195 1237 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 MARCH7Q9H992 704 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 MOCS1Q9NZB8 636 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 TRAF6Q9Y4K3 522 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 PCDHGA7Q9Y5G6 932 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 MYO18AQ92614 2054 aaKnown RBP12.66□□□□□ -0.38
TSKU-203ENST00000527881 TCRBV5S1A1TA0A578 114 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 GUCY1B2O75343 617 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 DLGAP3O95886 979 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 PSMA4P25789 261 aaKnown RBP12.66□□□□□ -0.38
TSKU-203ENST00000527881 LRPAP1P30533 357 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 HSD17B4P51659 736 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 PGGT1BP53609 377 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 CLCQ05315 142 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 SAMD4BQ5PRF9 694 aaKnown RBP12.66□□□□□ -0.38
TSKU-203ENST00000527881 FAM117BQ6P1L5 589 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 SLCO6A1Q86UG4 719 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 PQLC3Q8N755 202 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 NETO2Q8NC67 525 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 MCUQ8NE86 351 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 SHCBP1Q8NEM2 672 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 OR2T34Q8NGX1 318 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 OR2T3Q8NH03 318 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 ZNF669Q96BR6 464 aaPredicted RBP12.66□□□□□ -0.38
TSKU-203ENST00000527881 MTMR12Q9C0I1 747 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 POLR3FQ9H1D9 316 aaPredicted RBP12.66□□□□□ -0.38
TSKU-203ENST00000527881 NANOGQ9H9S0 305 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 SMCHD1A6NHR9 2005 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 ITGB4P16144 1822 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 M0R3G1 203 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 ASNA1O43681 348 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 MAGP20916 626 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 GNL1P36915 607 aaPredicted RBP12.66□□□□□ -0.38
TSKU-203ENST00000527881 AVPR1AP37288 418 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 SLC22A16Q86VW1 577 aa12.66□□□□□ -0.38
TSKU-203ENST00000527881 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.66□□□□□ -0.38
TSKU-203ENST00000527881 DHRS12A0PJE2 317 aa12.65□□□□□ -0.38
TSKU-203ENST00000527881 ALBP02768 609 aa12.65□□□□□ -0.38
TSKU-203ENST00000527881 PRKCGP05129 697 aa12.65□□□□□ -0.38
TSKU-203ENST00000527881 HSPA1AP0DMV8 641 aaKnown RBP12.65□□□□□ -0.38
TSKU-203ENST00000527881 HSPA1BP0DMV9 641 aaKnown RBP12.65□□□□□ -0.38
TSKU-203ENST00000527881 RAP1GAPP47736 663 aa12.65□□□□□ -0.38
TSKU-203ENST00000527881 SELENBP1Q13228 472 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms