RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 RELQ04864 619 aaPredicted RBP5.91□□□□□ -1.46
CD44-225ENST00000527326 KDSRQ06136 332 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 PPATQ06203 517 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 ENPEPQ07075 957 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 OVGP1Q12889 678 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 TCIRG1Q13488 830 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 PTK6Q13882 451 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 IDI1Q13907 227 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 KCTD2Q14681 263 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 PDK1Q15118 436 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 PRKD1Q15139 912 aaPredicted RBP5.91□□□□□ -1.46
CD44-225ENST00000527326 NFIL3Q16649 462 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 TYSND1Q2T9J0 566 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 PGS1Q32NB8 556 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 TBRG1Q3YBR2 411 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 Q3ZCU0 254 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 ZFP69Q49AA0 526 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 FSCBQ5H9T9 825 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 FGD3Q5JSP0 725 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 PRSS36Q5K4E3 855 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 SNAP47Q5SQN1 464 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 DCAF12L1Q5VU92 463 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 GPR107Q5VW38 600 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 CENPPQ6IPU0 288 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 ALKBH2Q6NS38 261 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 C11orf63Q6NUN7 778 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 ALKBH5Q6P6C2 394 aaKnown RBP5.91□□□□□ -1.46
CD44-225ENST00000527326 PAOXQ6QHF9 649 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 KIAA0408Q6ZU52 694 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 HFE2Q6ZVN8 426 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 ZNF767PQ75MW2 155 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 MICU3Q86XE3 530 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 GATAD2AQ86YP4 633 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 WFDC8Q8IUA0 241 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 KSR1Q8IVT5 923 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 CCDC60Q8IWA6 550 aaPredicted RBP5.91□□□□□ -1.46
CD44-225ENST00000527326 ADGRF2Q8IZF7 708 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 CCNYL1Q8N7R7 359 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 ATAD1Q8NBU5 361 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 NGDNQ8NEJ9 315 aaKnown RBP5.91□□□□□ -1.46
CD44-225ENST00000527326 APPL2Q8NEU8 664 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 OR5H6Q8NGV6 325 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 SLC30A5Q8TAD4 765 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 TRPM4Q8TD43 1214 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 RFFLQ8WZ73 363 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 NXPE3Q969Y0 559 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 CMTM5Q96DZ9 223 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 MYO19Q96H55 970 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 PRR11Q96HE9 360 aaPredicted RBP5.91□□□□□ -1.46
CD44-225ENST00000527326 MAGED4Q96JG8 741 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 B3GALT6Q96L58 329 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 DMRTB1Q96MA1 342 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 RIPOR3Q96MK2 946 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 BCL7BQ9BQE9 202 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 TMEM246Q9BRR3 403 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 LRRC19Q9H756 370 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 SMYD3Q9H7B4 428 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 BRD9Q9H8M2 597 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 ERVMER34-1Q9H9K5 563 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 ANKHQ9HCJ1 492 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 CYP4F12Q9HCS2 524 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 C11orf16Q9NQ32 467 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 RPRD1BQ9NQG5 326 aaKnown RBP5.91□□□□□ -1.46
CD44-225ENST00000527326 CNNM1Q9NRU3 951 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 DTLQ9NZJ0 730 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 FRRS1LQ9P0K9 344 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 PSMC3IPQ9P2W1 217 aaPredicted RBP5.91□□□□□ -1.46
CD44-225ENST00000527326 DNMT3BQ9UBC3 853 aaKnown RBP5.91□□□□□ -1.46
CD44-225ENST00000527326 COPG2Q9UBF2 871 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 CDH22Q9UJ99 828 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 CPSF3Q9UKF6 684 aaKnown RBP5.91□□□□□ -1.46
CD44-225ENST00000527326 PSME2Q9UL46 239 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 PRPF19Q9UMS4 504 aaKnown RBP5.91□□□□□ -1.46
CD44-225ENST00000527326 KCNJ14Q9UNX9 436 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 NR2E1Q9Y466 385 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 CACNG2Q9Y698 323 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 ZNF804BA4D1E1 1349 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 LRP6O75581 1613 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 RTL9Q8NET4 1388 aa5.91□□□□□ -1.46
CD44-225ENST00000527326 MARF1Q9Y4F3 1742 aaKnown RBP5.91□□□□□ -1.46
CD44-225ENST00000527326 ATAD5Q96QE3 1844 aa5.9□□□□□ -1.46
CD44-225ENST00000527326 PRSS51A0A1B0GVH4 220 aa5.9□□□□□ -1.46
CD44-225ENST00000527326 SAGE2PA6NJ88 616 aa5.9□□□□□ -1.46
CD44-225ENST00000527326 LRRC72A6NJI9 287 aa5.9□□□□□ -1.46
CD44-225ENST00000527326 EYA2O00167 538 aa5.9□□□□□ -1.46
CD44-225ENST00000527326 PLK4O00444 970 aa5.9□□□□□ -1.46
CD44-225ENST00000527326 AURKAO14965 403 aa5.9□□□□□ -1.46
CD44-225ENST00000527326 KPNA5O15131 536 aa5.9□□□□□ -1.46
CD44-225ENST00000527326 NOS1APO75052 506 aaPredicted RBP5.9□□□□□ -1.46
CD44-225ENST00000527326 ATG13O75143 517 aa5.9□□□□□ -1.46
CD44-225ENST00000527326 XYLBO75191 536 aa5.9□□□□□ -1.46
CD44-225ENST00000527326 NOL4O94818 638 aa5.9□□□□□ -1.46
CD44-225ENST00000527326 CDK14O94921 469 aa5.9□□□□□ -1.46
CD44-225ENST00000527326 MFN2O95140 757 aa5.9□□□□□ -1.46
CD44-225ENST00000527326 PTTG1O95997 202 aa5.9□□□□□ -1.46
CD44-225ENST00000527326 ERBB2P04626 1255 aa5.9□□□□□ -1.46
CD44-225ENST00000527326 YES1P07947 543 aa5.9□□□□□ -1.46
CD44-225ENST00000527326 H2AFB1P0C5Y9 115 aa5.9□□□□□ -1.46
CD44-225ENST00000527326 H2AFB2P0C5Z0 115 aa5.9□□□□□ -1.46
CD44-225ENST00000527326 GZMAP12544 262 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms