RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 RLN3Q8WXF3 142 aa17.59■□□□□ 0.41
LMX1B-203ENST00000526117 RUBCNQ92622 972 aa17.59■□□□□ 0.41
LMX1B-203ENST00000526117 LRIG1Q96JA1 1093 aa17.59■□□□□ 0.41
LMX1B-203ENST00000526117 TFR2Q9UP52 801 aa17.59■□□□□ 0.41
LMX1B-203ENST00000526117 C10orf142B7Z368 130 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 C1QTNF3-AMACRE9PGA6 284 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 SPOPO43791 374 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 AMPD1P23109 780 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 HOXD12P35452 270 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 NUMBP49757 651 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 IL10RBQ08334 325 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 KIF5AQ12840 1032 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 TAZQ16635 292 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 IFI16Q16666 785 aaKnown RBP17.58■□□□□ 0.4
LMX1B-203ENST00000526117 ZNF662Q6ZS27 426 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 KIAA1328Q86T90 577 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 MMAAQ8IVH4 418 aaKnown RBP17.58■□□□□ 0.4
LMX1B-203ENST00000526117 LRRC57Q8N9N7 239 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 PCDH19Q8TAB3 1148 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 FATE1Q969F0 183 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 CALN1Q9BXU9 219 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 SGK2Q9HBY8 427 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 ETNK2Q9NVF9 386 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 UBA2Q9UBT2 640 aaPredicted RBP17.58■□□□□ 0.4
LMX1B-203ENST00000526117 GMEB2Q9UKD1 530 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 CYP8B1Q9UNU6 501 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 MFHAS1Q9Y4C4 1052 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 ADGRG1Q9Y653 693 aa17.58■□□□□ 0.4
LMX1B-203ENST00000526117 SLC7A4O43246 635 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 BUB1O43683 1085 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 GFRA3O60609 400 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 TMCC1O94876 653 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 PRNPP04156 253 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 SLC8A1P32418 973 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 RECQLP46063 649 aaPredicted RBP17.57■□□□□ 0.4
LMX1B-203ENST00000526117 SNRPD1P62314 119 aaKnown RBP17.57■□□□□ 0.4
LMX1B-203ENST00000526117 MMRN1Q13201 1228 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 CARD16Q5EG05 197 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 PEAR1Q5VY43 1037 aaPredicted RBP17.57■□□□□ 0.4
LMX1B-203ENST00000526117 NCBP2-AS2Q69YL0 99 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 DAAM2Q86T65 1068 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 RNF10Q8N5U6 811 aaKnown RBP17.57■□□□□ 0.4
LMX1B-203ENST00000526117 OR2AP1Q8NGE2 309 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 RAPGEF5Q92565 580 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 FOXJ1Q92949 421 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 ERLEC1Q96DZ1 483 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 TOE1Q96GM8 510 aaKnown RBP17.57■□□□□ 0.4
LMX1B-203ENST00000526117 ZNF419Q96HQ0 510 aaPredicted RBP17.57■□□□□ 0.4
LMX1B-203ENST00000526117 CELF6Q96J87 481 aaKnown RBP17.57■□□□□ 0.4
LMX1B-203ENST00000526117 RNF157Q96PX1 679 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 TSGA10Q9BZW7 698 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 KDM4CQ9H3R0 1056 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 CD93Q9NPY3 652 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 TPX2Q9ULW0 747 aaKnown RBP17.57■□□□□ 0.4
LMX1B-203ENST00000526117 NCKAP1Q9Y2A7 1128 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 DUSP10Q9Y6W6 482 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 ZNF292O60281 2723 aa17.57■□□□□ 0.4
LMX1B-203ENST00000526117 TNRC6BQ9UPQ9 1833 aaKnown RBP17.56■□□□□ 0.4
LMX1B-203ENST00000526117 ZFHX2Q9C0A1 2572 aaPredicted RBP17.56■□□□□ 0.4
LMX1B-203ENST00000526117 MID1O15344 667 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 MAP3K13O43283 966 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 NRDCO43847 1150 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 IL1BP01584 269 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 CTSLP07711 333 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 CHRNA3P32297 505 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 DRD3P35462 400 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 GJC1P36383 396 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 CSNK1DP48730 415 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 RPL6Q02878 288 aaKnown RBP17.56■□□□□ 0.4
LMX1B-203ENST00000526117 SLC9A4Q6AI14 798 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 DPY19L3Q6ZPD9 716 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 ZNF354CQ86Y25 554 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 KATNAL2Q8IYT4 538 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 AADATQ8N5Z0 425 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 GPR161Q8N6U8 529 aaKnown RBP17.56■□□□□ 0.4
LMX1B-203ENST00000526117 PQLC3Q8N755 202 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 FRMD1Q8N878 549 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 PIP4K2CQ8TBX8 421 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 HEPHQ9BQS7 1158 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 DESI2Q9BSY9 194 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 BTBD1Q9H0C5 482 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 IL36AQ9UHA7 158 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 IPO11Q9UI26 975 aaKnown RBP17.56■□□□□ 0.4
LMX1B-203ENST00000526117 SARDHQ9UL12 918 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 INVSQ9Y283 1065 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 FCF1Q9Y324 198 aaKnown RBP17.56■□□□□ 0.4
LMX1B-203ENST00000526117 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.56■□□□□ 0.4
LMX1B-203ENST00000526117 WASF2Q9Y6W5 498 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 SPAG17Q6Q759 2223 aa17.56■□□□□ 0.4
LMX1B-203ENST00000526117 OTOGLQ3ZCN5 2332 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 PIEZO1Q92508 2521 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 LRRD1A4D1F6 860 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 J3KR12 359 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 DFFAO00273 331 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 FOXD2O60548 495 aaPredicted RBP17.55■□□□□ 0.4
LMX1B-203ENST00000526117 MAFKO60675 156 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 NDUFS2O75306 463 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 POP4O95707 220 aaKnown RBP17.55■□□□□ 0.4
LMX1B-203ENST00000526117 ZFXP17010 805 aaPredicted RBP17.55■□□□□ 0.4
LMX1B-203ENST00000526117 CTNNA1P35221 906 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms