RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 TP53BP1Q12888 1972 aaPredicted RBP17.36■□□□□ 0.37
CCS-203ENST00000526058 TBC1D3DA0A087WVF3 549 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 TBC1D3IA0A087WXS9 549 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 TBC1D3EA0A087X179 549 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 TBC1D3KA0A087X1G2 549 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 A0A1W2PPC4 97 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 TBC1D3FA6NER0 549 aaPredicted RBP17.35■□□□□ 0.37
CCS-203ENST00000526058 TBC1D3LB9A6J9 549 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 TBC1D3HP0C7X1 549 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 DESP17661 470 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 CSRP1P21291 193 aaKnown RBP17.35■□□□□ 0.37
CCS-203ENST00000526058 ETFBP38117 255 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 DNA2P51530 1060 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 PPP2CBP62714 309 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 PPP2CAP67775 309 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 POLD3Q15054 466 aaPredicted RBP17.35■□□□□ 0.37
CCS-203ENST00000526058 AGBL4Q5VU57 503 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 TBC1D3GQ6DHY5 549 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 TBC1D3CQ6IPX1 549 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 LEKR1Q6ZMV7 388 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 DPY19L3Q6ZPD9 716 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 TBC1D3Q8IZP1 549 aaPredicted RBP17.35■□□□□ 0.37
CCS-203ENST00000526058 RTL3Q8N8U3 475 aaKnown RBP17.35■□□□□ 0.37
CCS-203ENST00000526058 RNF214Q8ND24 703 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 TMIEQ8NEW7 156 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 ARRDC3Q96B67 414 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 IQCDQ96DY2 449 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 CCDC114Q96M63 670 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 ZDHHC5Q9C0B5 715 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 IL21RQ9HBE5 538 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 OSGEPQ9NPF4 335 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 AP4E1Q9UPM8 1137 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 SCINQ9Y6U3 715 aa17.35■□□□□ 0.37
CCS-203ENST00000526058 A0A087X0T9 212 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 KPNA3O00505 521 aaPredicted RBP17.34■□□□□ 0.37
CCS-203ENST00000526058 PLRG1O43660 514 aaKnown RBP17.34■□□□□ 0.37
CCS-203ENST00000526058 FAM228BP0C875 321 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 MYBL1P10243 752 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 CD59P13987 128 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 MIPP30301 263 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 RECQLP46063 649 aaPredicted RBP17.34■□□□□ 0.37
CCS-203ENST00000526058 KIF19Q2TAC6 998 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 HLA-BQ31612 363 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 CARD16Q5EG05 197 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 ARSIQ5FYB1 569 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 KCNT1Q5JUK3 1230 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 ERMARDQ5T6L9 678 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 PIP4P1Q86T03 277 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 GRIN3AQ8TCU5 1115 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 FNIP1Q8TF40 1166 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 TRIM11Q96F44 468 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 SLC6A18Q96N87 628 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 CEP44Q9C0F1 390 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 KLC2Q9H0B6 622 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 GAREM1Q9H706 876 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 ARHGAP20Q9P2F6 1191 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 IL36AQ9UHA7 158 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 WASF2Q9Y6W5 498 aa17.34■□□□□ 0.37
CCS-203ENST00000526058 TPRP12270 2363 aaKnown RBP17.33■□□□□ 0.37
CCS-203ENST00000526058 WASH4PA8MWX3 477 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 RASA4BC9J798 803 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 WNT9AO14904 365 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 SLC7A4O43246 635 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 RASA4O43374 803 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 KDELR3O43731 214 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 LEFTY1O75610 366 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 RNF8O76064 485 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 PRNPP04156 253 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 TPM3P06753 285 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 CEACAM1P13688 526 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 GRIA4P48058 902 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 CCR5P51681 352 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 TAS2R38P59533 333 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 TPI1P60174 286 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 TEAD4Q15561 434 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 NFKBIBQ15653 356 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 PIP5KL1Q5T9C9 394 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 CYP4V2Q6ZWL3 525 aaPredicted RBP17.33■□□□□ 0.36
CCS-203ENST00000526058 VPS36Q86VN1 386 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 ZNF354CQ86Y25 554 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 PCDH20Q8N6Y1 951 aaKnown RBP17.33■□□□□ 0.36
CCS-203ENST00000526058 NETO2Q8NC67 525 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 KCTD15Q96SI1 283 aaPredicted RBP17.33■□□□□ 0.36
CCS-203ENST00000526058 SNRNP25Q9BV90 132 aaKnown RBP17.33■□□□□ 0.36
CCS-203ENST00000526058 TM6SF2Q9BZW4 377 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 THAP2Q9H0W7 228 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 DHX35Q9H5Z1 703 aaKnown RBP17.33■□□□□ 0.36
CCS-203ENST00000526058 CATSPERBQ9H7T0 1116 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 MRPL47Q9HD33 250 aaKnown RBP17.33■□□□□ 0.36
CCS-203ENST00000526058 HPCAL4Q9UM19 191 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 ANKRD6Q9Y2G4 727 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.33■□□□□ 0.365e-7■■□□□ 13.9
CCS-203ENST00000526058 SNX11Q9Y5W9 270 aa17.33■□□□□ 0.36
CCS-203ENST00000526058 CXorf51AA0A1B0GTR3 108 aa17.32■□□□□ 0.36
CCS-203ENST00000526058 UPK3BL1B0FP48 263 aa17.32■□□□□ 0.36
CCS-203ENST00000526058 UPK3BL2E5RIL1 263 aa17.32■□□□□ 0.36
CCS-203ENST00000526058 EEF2KO00418 725 aaKnown RBP17.32■□□□□ 0.36
CCS-203ENST00000526058 KCNK3O14649 394 aa17.32■□□□□ 0.36
CCS-203ENST00000526058 CBFA2T2O43439 604 aa17.32■□□□□ 0.36
CCS-203ENST00000526058 PRPSAP2O60256 369 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms