RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 PCDH8O95206 1070 aa12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 EPB41P11171 864 aaKnown RBP12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 VASPP50552 380 aaPredicted RBP12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 IRAK1P51617 712 aa12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 PDX1P52945 283 aa12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 PITX1P78337 314 aaPredicted RBP12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 FZD2Q14332 565 aa12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 CT47A1Q5JQC4 288 aaPredicted RBP12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 TTI2Q6NXR4 508 aa12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 NEK5Q6P3R8 708 aa12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 TMEM270Q6UE05 265 aa12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 ATG14Q6ZNE5 492 aa12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 SH2D3CQ8N5H7 860 aa12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 WDR36Q8NI36 951 aaKnown RBP12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 EXTL1Q92935 676 aa12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 BTN2A3PQ96KV6 586 aa12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 BMFQ96LC9 184 aa12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 HSFY1Q96LI6 401 aa12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 PRMT1Q99873 361 aaKnown RBP12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 GPR27Q9NS67 375 aa12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 KIAA1257Q9ULG3 409 aa12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 ATXN7L1Q9ULK2 861 aaPredicted RBP12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 COQ4Q9Y3A0 265 aa12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 TLN1Q9Y490 2541 aaKnown RBP12.8□□□□□ -0.36
CCDC90B-205ENST00000525916 CCDC187A0A096LP49 1063 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 EME2A4GXA9 379 aaPredicted RBP12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 POM121BA6NF01 834 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 H3BM21 787 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 MUSKO15146 869 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 CSF2P04141 144 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 ITGA2BP08514 1039 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 PAEPP09466 180 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 FAM87AP0C7U9 286 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 NME1P15531 152 aaKnown RBP12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 ITGB6P18564 788 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 FKBP3Q00688 224 aaKnown RBP12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 TGIF1Q15583 401 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 CNGA2Q16280 664 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 DPCR1Q3MIW9 517 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 TMEM259Q4ZIN3 620 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 KYAT3Q6YP21 454 aaKnown RBP12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 USP53Q70EK8 1073 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 PARGQ86W56 976 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 ATP6V0D2Q8N8Y2 350 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 NELFBQ8WX92 580 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 RNF34Q969K3 372 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 MED15Q96RN5 788 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 TSG101Q99816 390 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 ARHGAP9Q9BRR9 750 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 SYNDIG1Q9H7V2 258 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 ST7Q9NRC1 585 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 KLF15Q9UIH9 416 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 PCDHB4Q9Y5E5 795 aa12.79□□□□□ -0.36
CCDC90B-205ENST00000525916 ANKRD36A6QL64 1941 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 SPTY2D1-AS1A0A0U1RR47 76 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 BICDL2A1A5D9 508 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 TRIM49BA6NDI0 452 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 KCNU1A8MYU2 1149 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 RAD51BO15315 384 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 AQP9O43315 295 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 SUV39H1O43463 412 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 TCEA3O75764 348 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 TRUB2O95900 331 aaKnown RBP12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 IGLV3-25P01717 112 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 SRCP12931 536 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 TBXAS1P24557 533 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 ERCC5P28715 1186 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 CHRNA3P32297 505 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 MLLT3P42568 568 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 PAK1Q13153 545 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 MAPK8IP2Q13387 824 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 FGL2Q14314 439 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 NR0B2Q15466 257 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 RABGAP1LQ5R372 815 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 TPRG1LQ5T0D9 272 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 TTC39BQ5VTQ0 682 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 KLHL10Q6JEL2 608 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 FBXL22Q6P050 247 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 ZNF574Q6ZN55 896 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 TPCN2Q8NHX9 752 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 LMX1AQ8TE12 382 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 KAT5Q92993 513 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 SGF29Q96ES7 293 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 FEM1AQ9BSK4 669 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 DYRK4Q9NR20 520 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 NCKIPSDQ9NZQ3 722 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 RWDD2AQ9UIY3 292 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 SALL4Q9UJQ4 1053 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 VPS28Q9UK41 221 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 OR51B4Q9Y5P0 310 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 CSNK1G3Q9Y6M4 447 aa12.78□□□□□ -0.36
CCDC90B-205ENST00000525916 CETN3O15182 167 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 LETM1O95202 739 aaPredicted RBP12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 MT-CO1P00395 513 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 JUNDP17535 347 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 SLC5A2P31639 672 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 GGCXP38435 758 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 OXCT1P55809 520 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 PDE1CQ14123 709 aaPredicted RBP12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 SPIDRQ14159 915 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms