RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 TNKS2Q9H2K2 1166 aa17.88■□□□□ 0.45
NR1H3-228ENST00000525441 NYNRINQ9P2P1 1898 aaKnown RBP17.88■□□□□ 0.45
NR1H3-228ENST00000525441 NCOR2Q9Y618 2525 aa17.88■□□□□ 0.45
NR1H3-228ENST00000525441 TBC1D3DA0A087WVF3 549 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 TBC1D3IA0A087WXS9 549 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 TBC1D3EA0A087X179 549 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 TBC1D3KA0A087X1G2 549 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 A0A1W2PPC4 97 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 TBC1D3FA6NER0 549 aaPredicted RBP17.87■□□□□ 0.45
NR1H3-228ENST00000525441 TBC1D3LB9A6J9 549 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 KPNA3O00505 521 aaPredicted RBP17.87■□□□□ 0.45
NR1H3-228ENST00000525441 KCNK5O95279 499 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 TBC1D3HP0C7X1 549 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 CSRP1P21291 193 aaKnown RBP17.87■□□□□ 0.45
NR1H3-228ENST00000525441 MIPP30301 263 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 HNRNPH3P31942 346 aaKnown RBP17.87■□□□□ 0.45
NR1H3-228ENST00000525441 GRIA4P48058 902 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 NOVA1P51513 510 aaKnown RBP17.87■□□□□ 0.45
NR1H3-228ENST00000525441 DNA2P51530 1060 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 ZNF135P52742 658 aaPredicted RBP17.87■□□□□ 0.45
NR1H3-228ENST00000525441 ZNF252P-AS1Q0IIN9 211 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 CNTN1Q12860 1018 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 TSR1Q2NL82 804 aaKnown RBP17.87■□□□□ 0.45
NR1H3-228ENST00000525441 POM121L1PQ3SYA9 428 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 CARD16Q5EG05 197 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 TBC1D3GQ6DHY5 549 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 TBC1D3CQ6IPX1 549 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 ALKBH5Q6P6C2 394 aaKnown RBP17.87■□□□□ 0.45
NR1H3-228ENST00000525441 PSTKQ8IV42 348 aaKnown RBP17.87■□□□□ 0.45
NR1H3-228ENST00000525441 TBC1D3Q8IZP1 549 aaPredicted RBP17.87■□□□□ 0.45
NR1H3-228ENST00000525441 ISG20Q96AZ6 181 aaKnown RBP17.87■□□□□ 0.45
NR1H3-228ENST00000525441 PPP1R16AQ96I34 528 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 TRIM7Q9C029 511 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 SLC32A1Q9H598 525 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 DHX35Q9H5Z1 703 aaKnown RBP17.87■□□□□ 0.45
NR1H3-228ENST00000525441 TM9SF3Q9HD45 589 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 DNAAF2Q9NVR5 837 aaKnown RBP17.87■□□□□ 0.45
NR1H3-228ENST00000525441 ZNHIT6Q9NWK9 470 aaKnown RBP17.87■□□□□ 0.45
NR1H3-228ENST00000525441 GPATCH2LQ9NWQ4 482 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 IL36AQ9UHA7 158 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 PCSK1NQ9UHG2 260 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 PCDH15Q96QU1 1955 aa17.87■□□□□ 0.45
NR1H3-228ENST00000525441 ASCC3Q8N3C0 2202 aaKnown RBP17.86■□□□□ 0.45
NR1H3-228ENST00000525441 A0A087X0T9 212 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 UPK3BL1B0FP48 263 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 UPK3BL2E5RIL1 263 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 EEF2KO00418 725 aaKnown RBP17.86■□□□□ 0.45
NR1H3-228ENST00000525441 PLRG1O43660 514 aaKnown RBP17.86■□□□□ 0.45
NR1H3-228ENST00000525441 KDELR3O43731 214 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 CER1O95813 267 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 FAM228BP0C875 321 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 PCK1P35558 622 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 NUDT1P36639 197 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 CSNK1EP49674 416 aaKnown RBP17.86■□□□□ 0.45
NR1H3-228ENST00000525441 METAP1P53582 386 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 RACK1P63244 317 aaKnown RBP17.86■□□□□ 0.45
NR1H3-228ENST00000525441 SLC14A1Q13336 389 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 PARP15Q460N3 678 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 CCDC122Q5T0U0 273 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 AGBL4Q5VU57 503 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 DPY19L3Q6ZPD9 716 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 ADAT2Q7Z6V5 191 aaKnown RBP17.86■□□□□ 0.45
NR1H3-228ENST00000525441 PLPP6Q8IY26 295 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 UMODL1-AS1Q8N2C9 162 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 ARFGAP1Q8N6T3 406 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 CHST14Q8NCH0 376 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 OR8K1Q8NGG5 319 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 CASKIN2Q8WXE0 1202 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 SKA1Q96BD8 255 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 HEPHQ9BQS7 1158 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 SNRNP25Q9BV90 132 aaKnown RBP17.86■□□□□ 0.45
NR1H3-228ENST00000525441 THAP2Q9H0W7 228 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 ARHGAP20Q9P2F6 1191 aa17.86■□□□□ 0.45
NR1H3-228ENST00000525441 FCF1Q9Y324 198 aaKnown RBP17.86■□□□□ 0.45
NR1H3-228ENST00000525441 A0A1B0GVT2 93 aa17.85■□□□□ 0.45
NR1H3-228ENST00000525441 RASA4BC9J798 803 aa17.85■□□□□ 0.45
NR1H3-228ENST00000525441 PLK4O00444 970 aa17.85■□□□□ 0.45
NR1H3-228ENST00000525441 DAPK3O43293 454 aa17.85■□□□□ 0.45
NR1H3-228ENST00000525441 RASA4O43374 803 aa17.85■□□□□ 0.45
NR1H3-228ENST00000525441 BUB1O43683 1085 aa17.85■□□□□ 0.45
NR1H3-228ENST00000525441 LRCH4O75427 683 aa17.85■□□□□ 0.45
NR1H3-228ENST00000525441 ZNF821O75541 412 aaPredicted RBP17.85■□□□□ 0.45
NR1H3-228ENST00000525441 CTSLP07711 333 aa17.85■□□□□ 0.45
NR1H3-228ENST00000525441 CEACAM1P13688 526 aa17.85■□□□□ 0.45
NR1H3-228ENST00000525441 PIGHQ14442 188 aaPredicted RBP17.85■□□□□ 0.45
NR1H3-228ENST00000525441 ARSIQ5FYB1 569 aa17.85■□□□□ 0.45
NR1H3-228ENST00000525441 PSAPL1Q6NUJ1 521 aa17.85■□□□□ 0.45
NR1H3-228ENST00000525441 PRPF39Q86UA1 669 aaKnown RBP17.85■□□□□ 0.45
NR1H3-228ENST00000525441 VSTM4Q8IW00 320 aa17.85■□□□□ 0.45
NR1H3-228ENST00000525441 OR2I1PQ8NGU4 316 aa17.85■□□□□ 0.45
NR1H3-228ENST00000525441 GRIN3AQ8TCU5 1115 aa17.85■□□□□ 0.45
NR1H3-228ENST00000525441 PEBP4Q96S96 227 aa17.85■□□□□ 0.45
NR1H3-228ENST00000525441 NOL6Q9H6R4 1146 aaKnown RBP17.85■□□□□ 0.45
NR1H3-228ENST00000525441 PREBQ9HCU5 417 aa17.85■□□□□ 0.45
NR1H3-228ENST00000525441 IP6K2Q9UHH9 426 aa17.85■□□□□ 0.45
NR1H3-228ENST00000525441 LEFTY1O75610 366 aa17.84■□□□□ 0.45
NR1H3-228ENST00000525441 CD160O95971 181 aa17.84■□□□□ 0.45
NR1H3-228ENST00000525441 GSRP00390 522 aa17.84■□□□□ 0.45
NR1H3-228ENST00000525441 CYP1A2P05177 515 aa17.84■□□□□ 0.45
NR1H3-228ENST00000525441 ADRB1P08588 477 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms